Gene Bamb_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3205 
Symbol 
ID4310481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3544662 
End bp3545804 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID638151047 
ProductAraC family transcriptional regulator 
Protein accessionYP_775095 
Protein GI115353256 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0350] Methylated DNA-protein cysteine methyltransferase
[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000040374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATGT CTAGAGTAGG CACCATCTAC ACTAGAGAGT GCGAGGTTCA GATGAAAACC 
GCCTATCCGA CCGACGATGC CCGCTGGGGC GCCGTGACCG CCCGCGATCC GCACGCGGAC
GGCGCGTTCT TCTATGGCGT GCGCACGACC GGCGTGTTCT GCCGCCCGAG CTGCGCGTCG
CGGCTGCCGC GGCGCGAGCA TGTGTCCTTC TTCGCCGATC CGGCCGCCGC GCGCGCGGCA
GGCTTTCGTC CGTGCAAGCG CTGCCAGCCG GAAGGGCTGC CGCGCGAGCT CGACATCGTC
AATCGCGCAT GCGCGGTGCT CGACGCGCAT CCGGAGCGGC TCACGCTGCA GCAGCTGAGC
GATGCCGTCC ACGTGAGCCC GTTCCACCTG CAGCGGCTGT TCAAGCGCGT GGTCGGCGTG
TCGCCGCGGC AGTACCAGGC CGCGCAGCGC GGCGCCGCGC TGCGCGAGGC GCTGCAAAGC
GGGCAGCCGG TCACGCAGGC GGCCGTCGAC GCGGGTTTCA ATTCGCCGTC GCGGCTCTAC
GCATCGGTGC CGCGCGAGCT GGGAATGGCG CCGTCCGCGT TCCGTCGCCA GGGCGCGGGC
CTCCGGATCG ACTATGCGAC CGCGTCGACG CCGCTCGGCA CGGTGCTGGT CGCCGCGACC
GAACAGGGCA TCTGCCGGAT CGCGTTCGGC GACGAACCGG CGCCGCTCGT CGACGAACTG
AAGGATGCGT TCGCGCGCGC CGAACTGGTC GAAGCGCCAT CGCGGCTCGC GCCGTTCGTC
GCGCAGATCC GCGCGTACCT CGACGGCACG CGGCACGCGT TCGACCTGCC GCTCGACATC
GCGCCGACCG CGTTCCAGCA GCGCGTCTGG GAAGCGCTGA CGCACATCCC GTACGGCGAA
ACGCGCAGCT ACTCGGAGAT CGCCGAGGCG CTCGGCTCGC CGCGTGCGGT GCGCGCCGTC
GCATCGGCCT GCGCGTCGAA TCCGGTCGCG CTCGCGATTC CGTGCCATCG TGTCGTGCAG
AAGGGCGGCG CGCTGGCCGG ATATCGCTGG GGCGTGCGCC GCAAGGCGAC GCTGCTCGCG
TCCGAAGCGC GCCATGTGCG CGACGATGAA ACCGAAGCCG TTGCGGAGGG CAACGTAGTT
TGA
 
Protein sequence
MPMSRVGTIY TRECEVQMKT AYPTDDARWG AVTARDPHAD GAFFYGVRTT GVFCRPSCAS 
RLPRREHVSF FADPAAARAA GFRPCKRCQP EGLPRELDIV NRACAVLDAH PERLTLQQLS
DAVHVSPFHL QRLFKRVVGV SPRQYQAAQR GAALREALQS GQPVTQAAVD AGFNSPSRLY
ASVPRELGMA PSAFRRQGAG LRIDYATAST PLGTVLVAAT EQGICRIAFG DEPAPLVDEL
KDAFARAELV EAPSRLAPFV AQIRAYLDGT RHAFDLPLDI APTAFQQRVW EALTHIPYGE
TRSYSEIAEA LGSPRAVRAV ASACASNPVA LAIPCHRVVQ KGGALAGYRW GVRRKATLLA
SEARHVRDDE TEAVAEGNVV