Gene Bamb_3191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3191 
Symbol 
ID4310467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp3528221 
End bp3528835 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID638151033 
Producthypothetical protein 
Protein accessionYP_775081 
Protein GI115353242 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0489705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTACTC GATACGAGCC TGCGCGACAG GCGCACGCAT GGAGCGCGGC CGATTTCGTC 
GGCGGCCATC CGGCGCTCGA CTTCCTGAAT ACGGTGGCCG ACACGGGCAA GACGCGCGAC 
GAGGACAAGC TCGCCGACTG GCCGGCCGTC CGTGCGTGGG CGGCGAAATC CGGGTTGCTG 
GCGGCGGCCG ACCTGACGCG GTTCCTGCGT CATCCTCGGC AGGACGGCGC CGACGAGCTG 
GCTGCGCTGC ACGGCTTTCG GGAGGATGCG TATGCGGCGC TCGCGTACCT GACGGCCGGC 
GACGGCGGCA GCCCCGGCGC GCGAGCGGCG GACCGGCTCG CCGTGGCGAT TCGCGATGCG 
ATCGGGCGCA GCACGTTCGA GGCCGTCGAC GGCCGCTTCG CGTGGCGCCC CGATGCGCGC 
GCCGCGTCGC GCTGGATCGA CGCGGCCGCG CTCGGGTTCG AGCATCTGCT GCGCGGTGAC 
GATTTCGCGC GCGTGCGGCA GTGCGGCCGC TGTACGTGGT TCTTCGTCGA TCGCGGCCGC 
GGCGTCGGGC GACGCTGGTG CGACATGCGT ACGTGCGGGA ACCGCGCGAA GGTGGAGGCG 
TTCAGGGAGC GGTGA
 
Protein sequence
MVTRYEPARQ AHAWSAADFV GGHPALDFLN TVADTGKTRD EDKLADWPAV RAWAAKSGLL 
AAADLTRFLR HPRQDGADEL AALHGFREDA YAALAYLTAG DGGSPGARAA DRLAVAIRDA 
IGRSTFEAVD GRFAWRPDAR AASRWIDAAA LGFEHLLRGD DFARVRQCGR CTWFFVDRGR 
GVGRRWCDMR TCGNRAKVEA FRER