| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3187 |
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| Symbol | |
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| ID | 4310463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3524336 |
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| End bp | 3525349 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151028 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_775077 |
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| Protein GI | 115353238 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0830654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG CCATTCTCGA CGACTACCAG GACGCCGTCC GCAAGCTGAA CTGCTTCGAG
ATGCTCGCCG AGCACGACGT GAAGGTCTTC AACAACACGG TGCGCGGCCT GGGGCAGCTC
GCGAGCCGTC TCGCGGAAGT CGAGGCGCTC GTGCTGATTC GCGAGCGCAC GCCGATTTCG
TCGCAACTGC TCGCCAAGCT GCCGAACCTG CGCATGATCA GCCAGACCGG CCGCATCTCG
ACCCACATCG ACCTCGAAGC GTGTACCGAC CGCGGCATCG CGGTGCTCGA AGGCACGGGT
TCGCCAGTCG CGCCGGCCGA ACTGACCTGG GCACTCGTGA TGGCCGCCCA GCGCCGCATT
CCGCAATACG TCGCAAACCT GAAGCAGGGT GCGTGGCAGC AGTCGGGCCT GAAGACGTCG
GCCATGCCGC CGAACTTCGG CCTGGGCCAG GTGCTGCGCG GCCAGACGCT CGGCATCTGG
GGCTACGGCA AGATCGGCCG GCTGGTCGCC GGCTATGGCA AGGCGTTCGG GATGAACGTG
CTGATCTGGG GCCGCGAGCA TTCACTCGAG GCCGCGCGCG CCGACGGCTA CACGGCCGCC
GAGAGCCGCG AAGCGCTGTT CGAGCAGAGC GACGTGCTGT CGCTGCACTT GCGCATGCAC
GACGACACGC GCGGGATCGT CAAGCAGGAA GACCTGATGC GGATGAAGCC GACGTCGCTG
CTCGTCAACA CGAGCCGCGC GGAGCTGCTC GAGGAAAACG CGCTCGTCAA CGCGCTGTCG
CACAACCGTC CGGGGATGGT CGCGATCGAC GTGTTCGAAA GCGAGCCGAT CCTGCAAGGC
TACAGCCTGC TGCGGATGGA AAACGTGATC TGCACGCCGC ACATCGGCTA CGTCGAACGC
GAAAGCTACG AGCTCTATTT CAGCGCGGCT TTCCGGAACA TCCTCGCGTT CGACCAGGGC
GACATGTCGA GCGTGGTCAA CCCGGAAGCA CTGACGCCGC GCCGCGTGCG CTGA
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| Protein sequence | MKIAILDDYQ DAVRKLNCFE MLAEHDVKVF NNTVRGLGQL ASRLAEVEAL VLIRERTPIS
SQLLAKLPNL RMISQTGRIS THIDLEACTD RGIAVLEGTG SPVAPAELTW ALVMAAQRRI
PQYVANLKQG AWQQSGLKTS AMPPNFGLGQ VLRGQTLGIW GYGKIGRLVA GYGKAFGMNV
LIWGREHSLE AARADGYTAA ESREALFEQS DVLSLHLRMH DDTRGIVKQE DLMRMKPTSL
LVNTSRAELL EENALVNALS HNRPGMVAID VFESEPILQG YSLLRMENVI CTPHIGYVER
ESYELYFSAA FRNILAFDQG DMSSVVNPEA LTPRRVR
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