| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3185 |
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| Symbol | |
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| ID | 4310461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3520118 |
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| End bp | 3522715 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638151026 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_775075 |
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| Protein GI | 115353236 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAAG CTCTGATCAT TGCGGAAAAG CCTTCTGTCG CGAACGACAT CGCGCGCGCT
TTGGGCGGCT TTACCAAGCA TGACGAATAC TTCGAAAGCG ACGAATTCGT CCTTTCGTCC
GCGGTCGGCC ACCTGCTGGA AATCGCCGCC CCGGAAGAGT ACGAGGTCAA GCGCGGCAAA
TGGAGCTTCG CTCATCTGCC CGTCATCCCC CCGCATTTCG ACCTCAACCC GATTGCAAAA
AGCGAATCGC GCCTGAAGGT CCTTACCAAG CTGATGAAGC GCAAGGACGT CGACCGCCTG
ATCAACGCAT GTGACGCGGG GCGCGAGGGC GAACTGATTT TCCGCCTGAT CGTGCAGCAT
GCGAAGGCGA AGCAGCCGGT CCAGCGCCTG TGGCTGCAGT CGATGACGCC GCAGGCGATT
CGCGACGGTT TCGCGCACCT GCGCAGCGAC ACCGACATGC AACCGCTCGC CGACGCCGCA
CGCTGCCGCT CCGAAGCCGA CTGGCTCGTC GGGATCAACG GCACCCGCGC GATGACCGCG
TTCAACAGCA AGGGCGGCGG CTTCTTCCTG ACGACCGTCG GCCGCGTTCA GACGCCAACG
CTGTCGATCG TCGTCGAACG TGAAGAGAAA ATCCGCCGCT TCGTCCCGCG GGACTACTGG
GAAGTGAAGG CCGCGTTCGC CTGCGCGAAC GGCTTCTACG AAGGCAAGTG GTACGACCCG
AAATTCAAGC GGGACGAGTT CGATCCTGAA AGGCGCGACT CCCGCCTGTG GAGCCTGCCG
GCCGCCGAAA CCATCGTCGC CGCATGCCGC GACCAGGTCG GCACGGTATC CGAGGAATCG
AAGCCGTCGA CCCAGCTGTC GCCGCTGCTG TTCGATCTGA CGAGCCTGCA GCGCGAGGCG
AACAGCCGCT TCGGCTTCTC CGCGAAGAAT ACGCTCGGCC TCGCGCAGGC GCTGTATGAA
AAGCACAAGG TGCTGACGTA CCCGCGTACC GACGCGCGCG CGCTGCCGGA AGACTACATT
TCGACGGTGC AGTCGACGCT CGAAATGCTC AAGGAGAGCC ACAACTACCT GCCGCATGCG
AAGCGGGTGC TGGACCAGGG CTGGGTGAAG CCGAACAAGC GGATCTTCGA CAATTCGAAG
ATCAGCGACC ACTTCGCCAT CATCCCGACG CTGCAGGCGC CGAAGTCGCT GTCCGAGCCG
GAGCAGAAGC TGTACGACAT GGTCGTGAAG CGCTTCCTCG CGGTGTTCTT CCCGGCGGCC
GAATTCCGTG TCACGACGCG GATCACCGAA GTCGCCGGTC ATCACTTCAA GACCGAAGGC
AAGGTGCTCG TCGAGCCGGG CTGGCTGCAG GTGTACGGCC GCGACGCCGA AGGCGCGGAC
GCGAACCTCG TGCCGGTGCA GAAGGACGAG AAGGTGAAGA CGGACGAGAT CGCCGCCGTG
GCGCTCGTGA CCAAGCCGCC CGCACGCTAC TCCGAAGCGA CGCTGTTGTC GGCAATGGAA
GGCGCGGGCA AGCTCGTCGA GGACGACGAG CTGCGCGAGG CGATGGCCGC GAAGGGCCTC
GGCACGCCGG CAACGCGCGC GGCGATCATC GAAGGCCTAC TGGGCGAAAA ATATCTCGTC
CGTGAAGGCC GCGAGCTGAT CCCGACCGCG AAGGCATTCC AGCTGATGAC GCTGCTGCGC
GGGCTCGGCG TGAAGGAGCT GACCGCGCCC GAGCTCACCG GCGAATGGGA ATACAAGCTG
TCGCAGATGG AGCGCGGCAA CCTCGGCCGC GATGCGTTCA TGCAGGAAAT CGCCCGCATG
ACGCAGCAGA TCGTCAAGCG CGCGAAGGAA TACGATTCCG ACACGATCCC CGGCGATTAC
GCGACGCTCC AGACGCCGTG CCCGAACTGC GGCGGCCAGG TGAAGGAAAA CTACCGCCGC
TTCGCGTGCA CGAAGTGCGA GTTCTCGATC TCGAAGATTC CGGGCAGCCG GCAGTTCGAG
ATCGCGGAAG TCGAGGAACT GCTGCAGCAG AAGACCATCG GTCCGCTGTC CGGTTTCCGC
AGCAAGATGG GCCGTCCGTT CTCGGCGATC CTGAAGCTCT CGTTCGACGA CGAAACGAAG
AACTACAAGC TCGAGTTCGA CTTCGGCCAG GACCAGGGCG GCGAGGAAGG CGAGGCGCCC
GACTTCTCCG AGCAGGAACC GGTCGGCGCG TGCCCGAAAT GCAACGGCCG CGTGTTCGAG
CACGGGATGA GCTATGTGTG CGAGCACTCG GTCGCGAATC CGAAGACCTG CGACTTCCGT
TCGGGCAAGG TGATCCTGCA GCAGGAAATC ACGCGCGACC AGATGGCCAA GCTGCTCGCC
GACGGTCGCA CGGATCTGAT GCCGAACTTC AAGTCGTCGC GCACGGGCCG CAACTTCAAG
GCGTTCCTCG TGAAGCAGCC GGACGGCAAG ATCGGTTTCG AGTTCGAAAA GAAGGAGCCG
AAGGCTGCCG CCGCGAAGAA GACGGCAAAA TCGGCGACGA AGGATGCCGA AACCGTGACG
GAAGGCGCCG ACGAGAAACC GGCACCGGCC CGCAAGACCG CCGCCCGCAA GACGACGGCG
CGCAAGACGG GCTCGTAA
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| Protein sequence | MSKALIIAEK PSVANDIARA LGGFTKHDEY FESDEFVLSS AVGHLLEIAA PEEYEVKRGK
WSFAHLPVIP PHFDLNPIAK SESRLKVLTK LMKRKDVDRL INACDAGREG ELIFRLIVQH
AKAKQPVQRL WLQSMTPQAI RDGFAHLRSD TDMQPLADAA RCRSEADWLV GINGTRAMTA
FNSKGGGFFL TTVGRVQTPT LSIVVEREEK IRRFVPRDYW EVKAAFACAN GFYEGKWYDP
KFKRDEFDPE RRDSRLWSLP AAETIVAACR DQVGTVSEES KPSTQLSPLL FDLTSLQREA
NSRFGFSAKN TLGLAQALYE KHKVLTYPRT DARALPEDYI STVQSTLEML KESHNYLPHA
KRVLDQGWVK PNKRIFDNSK ISDHFAIIPT LQAPKSLSEP EQKLYDMVVK RFLAVFFPAA
EFRVTTRITE VAGHHFKTEG KVLVEPGWLQ VYGRDAEGAD ANLVPVQKDE KVKTDEIAAV
ALVTKPPARY SEATLLSAME GAGKLVEDDE LREAMAAKGL GTPATRAAII EGLLGEKYLV
REGRELIPTA KAFQLMTLLR GLGVKELTAP ELTGEWEYKL SQMERGNLGR DAFMQEIARM
TQQIVKRAKE YDSDTIPGDY ATLQTPCPNC GGQVKENYRR FACTKCEFSI SKIPGSRQFE
IAEVEELLQQ KTIGPLSGFR SKMGRPFSAI LKLSFDDETK NYKLEFDFGQ DQGGEEGEAP
DFSEQEPVGA CPKCNGRVFE HGMSYVCEHS VANPKTCDFR SGKVILQQEI TRDQMAKLLA
DGRTDLMPNF KSSRTGRNFK AFLVKQPDGK IGFEFEKKEP KAAAAKKTAK SATKDAETVT
EGADEKPAPA RKTAARKTTA RKTGS
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