Gene Bamb_3181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3181 
Symbolfmt 
ID4310457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3516488 
End bp3517471 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content73% 
IMG OID638151022 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_775071 
Protein GI115353232 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATA CGTTGCGCGT GATTTTTGCC GGCACGCCGG AATTCGCCGC GGCCGCACTC 
GCCGCGATCC ACGAGGCCGG TTTTCCGGTG CCGCTCGTGC TCACCCAGCC CGATCGCCCT
GCCGGACGCG GGATGAAACT GCAGGCGAGC GCCGTGAAGC GCTATGCCGT CGAGCACGGG
ATGCCCGTCG CGCAGCCGCC GTCGCTGCGC CGCGCGGGCA AGTACCCGGC GGAGGCAGCC
GACGCGATCG AGCTGCTGCG CACGACCCCC CACGACGTGA TGGTGGTCGC CGCATACGGC
CTGCTGCTGC CGCAGGAGGT GCTTGACATT CCGCGCGCCG GCTGCATCAA CATCCATGCG
TCGCTGCTGC CGCGCTGGCG CGGCGCCGCG CCGATCCACC GCGCGATCGA GGCCGGTGAC
GCCGAGACGG GCGTCACGCT GATGCAGATG GACGTCGGCC TCGACACCGG CGCGATGATC
GACGAAGCGC GCGTCGCGAT CGCGCCCGAC GATACGACCG CCACCCTGCA CGACCGGCTG
GCCGCCGACG GCGCGCGGCT GATCGTCGAT GCGCTGGTGC GGCTCGAGCG CGACGGCGCA
TTGCCCGCCA CCCCGCAGCC GGCCGACGGC GTGACCTATG CGGAAAAGAT CGGCAAGCAC
GAGGCGGCGC TCGACTGGCG CAAGCCGGCC GACGTGCTCG CGCGCCAGGT GCGCGCGTTC
GACCCGTTCC CGGGCGGCGT CGCGACGCTC GACGGCGCGG CCATCAAGCT TTGGGCGGCC
GAGCCCGTGG CGGCGCGCGG CGACGCGGCG CCCGGCACGA TCGTCGACGC AGCGCCGGAA
GGCGTGATCG TCGCGTGCGG CAGCGGCGCG CTACGCGTCA CGCAACTGCA GAAGCCGGGC
GGCAAGCGGT TGCCCGCGCG TGAATTCCTG GCCGGCTCGC CGCTCGCCGC AGGCCAGCGT
TTCGCGTTGC CCGACGGGGC CTGA
 
Protein sequence
MTHTLRVIFA GTPEFAAAAL AAIHEAGFPV PLVLTQPDRP AGRGMKLQAS AVKRYAVEHG 
MPVAQPPSLR RAGKYPAEAA DAIELLRTTP HDVMVVAAYG LLLPQEVLDI PRAGCINIHA
SLLPRWRGAA PIHRAIEAGD AETGVTLMQM DVGLDTGAMI DEARVAIAPD DTTATLHDRL
AADGARLIVD ALVRLERDGA LPATPQPADG VTYAEKIGKH EAALDWRKPA DVLARQVRAF
DPFPGGVATL DGAAIKLWAA EPVAARGDAA PGTIVDAAPE GVIVACGSGA LRVTQLQKPG
GKRLPAREFL AGSPLAAGQR FALPDGA