| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3178 |
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| Symbol | |
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| ID | 4310454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3513213 |
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| End bp | 3514601 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638151019 |
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| Product | sun protein |
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| Protein accession | YP_775068 |
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| Protein GI | 115353229 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGAA CCCGTTCCTC TGCTCCGTCT TCCTCCGGCC GCCCCGCGCG CCTGTCCGCG
CTGCGTCTCG CGCCCGATTC GCTCGGCTTC GCGCTCGACG CGGCCGCGCA GGCAGTCGAT
GCGGTGCGGC GCGGCACCGC GCTGCCGGCG GCACTGGCCG CGGTGTTCGC GCAGATGCCG
GCCGACGCGC AGGCGCTGGC GCGCGGCGCG ACGCAGGACG TCGCTTACCG GACGATGCGG
CGCCTCGGCA GCGCGGACTG GCTGATCGGC CGGCTCGTCA GCAAGGCGCC GCCCGCGCAC
GTGCAGGCGG TACTCGCCGC CGCGCTCGCG CTGCTGCTCG ATCCGGAGGA GACGGCCGCG
TATCCGGCGT TCACGATCGT CGACCAGGCC GTGACCGTGA TCGGCGCGCG GCGCGAATTC
GCGTTCGCGA AGGGGCTGGT GAACGCGGTG CTGCGCCGTT TCCAGCGTGA GCGCGACGCG
CTCGTCGCGG CGCTGCGGGA CGATCCGGTC GCCCGCTGGA ACTACCGTCC GTGGTGGATC
GATGCGGTGA AGCGCGCGTG GCCGGACGCA TGGCAGGCGA TCCTCGCCGC CGGCGAGCGC
CAGGGGCCGC TGACGCTGCG CGTGAACGCG CGCCGTGCGA GCGTCGACGC GTATCTCGAC
ACGCTGCGCG CGAACGGGAT CGACGCGACC GCGATCGGCC GCCATGCGGT GCGGCTCGCA
TCGGCGCTGC CGGTCGATCG CATTCCGGGC TTCGCGGACG GCGTCGTGTC GGTGCAGGAT
GCCGGCGCGC AGCTCGCCGC CGAATGGCTC GGCGCGCGTG ACGGCATGCG CGTGCTCGAC
GCATGCGCGG CACCGGGCGG CAAGACCGGT CATATCCTCG AGCTGGCCGG CGCGGAGGTC
GTTGCGCTCG AAAGCGACGC GACCCGTGCG GCGCGCATCG GCGAGAACCT CGCGCGCCTG
TCGCTCACGG CGGACGTGCG CGTCGGCGAT GCCGGCGCGC CGGATGCGTG GTACGACGGC
AGGCCGTTCG ACCGCATCCT CGCCGACGTG CCGTGCTCGG CGTCAGGCAT CGTGCGCCGT
CATCCCGACA TCCGCTGGCT GCGCCGCGAA GCCGACATCG CGGCGCTCGT CGCGGAACAG
CGCCGCATCC TGACGGCGTT GTGGCCGCTC GTGAAGCCGG GCGGCGAACT GCTCTACGTG
ACGTGTTCGA TCTTCCCCGA GGAGGGCGAA TTGCAGGCCC GCTGGTTTGA AGCGGCCTGT
GAAGATGCGG TACGATTGGA CGCGCCCGGC CAACTGCTGC CCGGCGGCGT GCCCGCCGGA
GCGGCCGGCG CACGCGACCA GACCACCGAT CACGACGGAT TTTTCTACGC GCGGTTTCAG
AAACGGTGA
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| Protein sequence | MTRTRSSAPS SSGRPARLSA LRLAPDSLGF ALDAAAQAVD AVRRGTALPA ALAAVFAQMP
ADAQALARGA TQDVAYRTMR RLGSADWLIG RLVSKAPPAH VQAVLAAALA LLLDPEETAA
YPAFTIVDQA VTVIGARREF AFAKGLVNAV LRRFQRERDA LVAALRDDPV ARWNYRPWWI
DAVKRAWPDA WQAILAAGER QGPLTLRVNA RRASVDAYLD TLRANGIDAT AIGRHAVRLA
SALPVDRIPG FADGVVSVQD AGAQLAAEWL GARDGMRVLD ACAAPGGKTG HILELAGAEV
VALESDATRA ARIGENLARL SLTADVRVGD AGAPDAWYDG RPFDRILADV PCSASGIVRR
HPDIRWLRRE ADIAALVAEQ RRILTALWPL VKPGGELLYV TCSIFPEEGE LQARWFEAAC
EDAVRLDAPG QLLPGGVPAG AAGARDQTTD HDGFFYARFQ KR
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