| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3174 |
|---|
| Symbol | |
|---|
| ID | 4310656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3508294 |
|---|
| End bp | 3509028 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638151014 |
|---|
| Product | exsB protein |
|---|
| Protein accession | YP_775064 |
|---|
| Protein GI | 115353225 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0603] Predicted PP-loop superfamily ATPase |
|---|
| TIGRFAM ID | [TIGR00364] exsB protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.361858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTCGGA CAGACGCTAA AGACGGCGCG CTCGTGCTGT TTTCCGGCGG GCAGGACTCG
GCCACGTGCG TGGCCTGGGC CCTGGAACGC TATCAGACGG TCGAGACGCT CGGCTTCGAT
TACGGCCAGC GCCACCGCGT CGAACTCGAA TGTCGCGAAG GCGTGCGCGA CGCGCTGAAG
CATCGGTTTC CCGCCTGGGC CGGCCGCCTC GGCGACGATC ACATGATCGA CCTGTCGGTG
CTCGGCGCGA TCAGCGATAC CGCGATGACG CGCACGATCG AGATCGAGAC CACGGCGAAT
GGCTTGCCGA ACACGTTCGT GCCGGGCCGC AACCTGCTGT TCATGACGAT CGCGGCCGCG
ATCGCCTATC GCCGCGGGCT GCGCGTGCTG GTCGGCGGGA TGTGCGAGAC CGATTTCTCG
GGCTACCCCG ACTGCCGCGA CGACACGATG AAGGCGCTGC AGGTCGCGCT GAACCTCGGG
ATGGACACGC GCATCGTGCT CGAGACGCCG CTGATGTGGC TCGACAAGGC GCAGACCTGG
CAGCTCGCCG AACAGCTCGG CGGCGATGCG CTCGTCGAGC TGATCCGCGT CGAGACGCAC
ACGTGCTACG TGGGCGAGCG CGCGGAACTG CACGACTGGG GCTTCGGCTG CGGCGAATGC
CCGGCCTGCA AGCTGCGCAA GCGCGGCTAC GAGGCCTACC TGAAGGGCGA GCGGGTGACC
GAAGCGCCGC TGTGA
|
|---|
| Protein sequence | MIRTDAKDGA LVLFSGGQDS ATCVAWALER YQTVETLGFD YGQRHRVELE CREGVRDALK
HRFPAWAGRL GDDHMIDLSV LGAISDTAMT RTIEIETTAN GLPNTFVPGR NLLFMTIAAA
IAYRRGLRVL VGGMCETDFS GYPDCRDDTM KALQVALNLG MDTRIVLETP LMWLDKAQTW
QLAEQLGGDA LVELIRVETH TCYVGERAEL HDWGFGCGEC PACKLRKRGY EAYLKGERVT
EAPL
|
|---|
| |