| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3159 |
|---|
| Symbol | |
|---|
| ID | 4310641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3492211 |
|---|
| End bp | 3493263 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638150999 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_775049 |
|---|
| Protein GI | 115353210 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.146066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA CCTACGCTTA CGCGGCGACC GATGCGCAAT CGCCGCTCGC CCCGTTCGAA
TTCCAGCGCC GCGCGCTGCG CGACCTCGAC GTCCAGATCG AGGTGCTGTA CTGCGGCGTC
TGCCACTCGG ACCTGCACCA GGCCCGCAAC GAATGGCGCA ACACGATCTA TCCGGTCGTG
CCGGGCCATG AAATCGTCGG CCGCGTGACC GCAACCGGCC CGCAGGTGTC GCGTTTCAAG
GTCGGCGAGC TGGTCGGCGT CGGCTGTCTC GTCGATTCGT GCCGCACCTG CCCGAGCTGC
GCGGAAGGTC TCGAACAGTA TTGCGAGAAC GGCTTCGTCG GCACCTACAA CGGCCAGGAC
CGCGTGACGG GCGACATCAC GTACGGCGGC TATTCGACCC AGCTCGTCGT CGACGAGGCG
TTCGTGCTGC GCGTGCCCGA GACGCTGGAC CCGGCCGGCG CCGCGCCGCT GCTGTGCGCG
GGGATCACGA CCTACTCGCC GCTGCGCCAG TGGAACGTCG GGCCCGGCAA GAAGGTCGGG
ATCGTCGGCC TCGGCGGGCT CGGCCACATG GGCGTGAAGC TCGCGCGCGC GATGGGCGCG
CACGTCGTGC TGTTCACGAC CTCGCCGTCG AAGATCGAGG ACGGCAAGCG GCTCGGCGCG
CACGAAGTGG TGATTTCGAA GGACGAAGCT CAGATGAACG CGCACCTGAA CAGCTTCGAC
TTCATCCTGA ACACGGTGGC CGCGCAGCAC GACCTGAATC CGTTCCTGCA CCTGCTGAAG
CGCGACGGCA CGATGACGCT CGTCGGCGCG CCGGAGCACG ACCATCCGTC GCCGCAGGTG
TTCAACCTGA TCTTCAAGCG CCGCCGCCTC GCGGGCTCGC TGATCGGCGG GATCGCGGAA
ACGCAGGAAA TGCTCGATTT CTGCGCGGAG CACGGGATCA CGTCGGACAT CGAAACGATC
CCGATGCAGC AGATCAATGC CGCTTACGAG CGCATGCTCA AGAGCGACGT GAAGTATCGG
TTCGTGGTGG ACATGGCGTC GCTCAAGCAG TAA
|
|---|
| Protein sequence | MSTTYAYAAT DAQSPLAPFE FQRRALRDLD VQIEVLYCGV CHSDLHQARN EWRNTIYPVV
PGHEIVGRVT ATGPQVSRFK VGELVGVGCL VDSCRTCPSC AEGLEQYCEN GFVGTYNGQD
RVTGDITYGG YSTQLVVDEA FVLRVPETLD PAGAAPLLCA GITTYSPLRQ WNVGPGKKVG
IVGLGGLGHM GVKLARAMGA HVVLFTTSPS KIEDGKRLGA HEVVISKDEA QMNAHLNSFD
FILNTVAAQH DLNPFLHLLK RDGTMTLVGA PEHDHPSPQV FNLIFKRRRL AGSLIGGIAE
TQEMLDFCAE HGITSDIETI PMQQINAAYE RMLKSDVKYR FVVDMASLKQ
|
|---|
| |