Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3158 |
Symbol | |
ID | 4310640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3491039 |
End bp | 3491983 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638150998 |
Product | AraC family transcriptional regulator |
Protein accession | YP_775048 |
Protein GI | 115353209 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTCC AGCCCCTTTT CGACGATATG GGCGACCGTG TGCGGCGCCG CATGATCGAG CTGCATTCGA GCCTCGCGCC GAACGAGGGC GATACGCTGG CGGCGCTCGA CGGCGTGCGC TTCTTCCGCG TGAGCCGCCC CGTGCCGCGC ATGCCGGTGC TGTACGAGCC GAGCATCATC GTCGTGTGCC AGGGCCGCAA GCTCGGCTAT CTCGGCGACC GCTCGTTCGT CTACGACGCG CAGCAGTATC TCGTGCTGTC GGTGCCGCTG CCGTTCGAAT GCGAAACCTT CGCGAGCCCG GACGAGCCGT TTCTCGCGAT CTCGATCCGC GTCGATCTCG CGGTGATCGC CGAGCTCGCG ATCCTGCTCG ACGAGACGCT TGGCGCGGCG GTCAGCGAGC CGCACGGCGT CTATTCGACG CCGCTCGATG CGCCGCTCGC CGACGCGGTG GTGCGGCTCC TCGAAGCGCT CGCGTCGCCG CACGACACCT GCGTGCTCGG GCCGGCGATC ATGCGCGAGA TCGCATACCG CGTGCTGACG GGCGCGCAGG GCGACGCGAT TCGCGCGGCG CTCGCCCAGC AGCATCATTT CGGCCGCGTC GCGAAGGCGC TGCGGCGCAT CCATGCGGAC CTGAAGGCCG ATCTCGATGT CGAGACGCTC GCGCGCGAGG CCGGGATGAG CCTCGCCGTG TTCCACGCGC AGTTCAAGCA CGTGACGGCG ACGTCGCCGA TGCAGTATGT GAAGGCCGCG CGCCTGCACC AGGCGCGCTT GATGATGGTG CAGGACGGCG TCGGCGCGGG TGCCGCCGCC GCGCGGGTCG GCTATGCGAG CGCGTCGCAG TTCAGCCGCG AATTCAAGCG GCTGTTCGGC CGCAGTCCCG GTGACGAAGT GCGCTGGATG CGCGAGAGCG GCAGCCGGCC GGTCGAATCG GGCGTCGGCG CGTAG
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Protein sequence | MSFQPLFDDM GDRVRRRMIE LHSSLAPNEG DTLAALDGVR FFRVSRPVPR MPVLYEPSII VVCQGRKLGY LGDRSFVYDA QQYLVLSVPL PFECETFASP DEPFLAISIR VDLAVIAELA ILLDETLGAA VSEPHGVYST PLDAPLADAV VRLLEALASP HDTCVLGPAI MREIAYRVLT GAQGDAIRAA LAQQHHFGRV AKALRRIHAD LKADLDVETL AREAGMSLAV FHAQFKHVTA TSPMQYVKAA RLHQARLMMV QDGVGAGAAA ARVGYASASQ FSREFKRLFG RSPGDEVRWM RESGSRPVES GVGA
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