Gene Bamb_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3157 
Symbol 
ID4310639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3489950 
End bp3490984 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content72% 
IMG OID638150997 
Productpeptidase M48, Ste24p 
Protein accessionYP_775047 
Protein GI115353208 
COG category[R] General function prediction only 
COG ID[COG4784] Putative Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCAATG ACCGCCTGCT TCGCGCCGCA CGCGTCGCCG CCGCACTGAG CGTCGGCGTC 
GCGGCGCTCG GCGCGGCGGC AAGCACGCAT CCGACCGACG CCGGGGCAGC CGCGGCCGGC
TCCGCGGCGG CTGCGCCGTC CACGCCGGCG ACCACCGTCG CGCCGTCTGC CGCCGAAGCC
GCGCAGCCGA GCGGCGGGGC CGTGCCGTCG AAAGCCTATG CGCCGACGTC GCAGCAGGTC
CGCTACGGCG ACGCGATCGC GTTCCGCACG CTGATCCCGT CGCCGCTGCT CGAACAGCTG
ACCGCGAGCG AATACGCGCA GATCGTGCAA ACGGCCGCCG ACAGCGACCG CCTGCTGCCC
GCGAATCAGC CGCGCGTGAA ACGCCTGCGC GCGATCGTCA TGAAGCTGGC GCCGTATTCG
GTGAAGTGGA ACGATCGCGT GAAGAGCTGG GCGTGGGACG TCAATGCGAT CCGCTCGCGC
GACATCCGCG TCACGTGCCT GCCGGGCGGC AAGGTGCTCG TGTACGGCGG GATGCTCGAT
CGCGTCCGCC TGAACGACGA CGAACTCGGC GTGCTGCTTG CGCACGGCAT CGCCCATGCG
CTGCGCGAAC ACGCACGCAG CAATCTCGGC ACGGCGTCGC AAACGTCGCT GCGCGCGGCC
GCGCTGCCGC CGCTGTTCGG CGTCGGCGAT CCGCTGCCGC AGGCGCTGAA CCTCGGCGCA
CGTCTGCAGA CGCTGCGCTA CGACCCGACC GACGAGACCG AAGCCGACGT GATCGGCGGC
GACATCGCCG CCCGCGCGGG CTTCGATCCG CGCGCGGCGA TCACGCTGTG GGACAAGCTC
GCGGCGGCCA CCCGCGCGAA CAAGACGTCG GGATTCATCT ACACGCATCC GTACGGCGCG
ACGCGGCGGC AGGATCTGCT GAACCGGCTG CAGGACCTGA TGCCGCTGTA TGCGAAGGCG
ACGGGCAAGC GCGTCGACAC GCTGCCCGAC TATGCGGGCA TCAGCGCGCA GCGACGCAAG
GTCGCGCGGC GCTGA
 
Protein sequence
MRNDRLLRAA RVAAALSVGV AALGAAASTH PTDAGAAAAG SAAAAPSTPA TTVAPSAAEA 
AQPSGGAVPS KAYAPTSQQV RYGDAIAFRT LIPSPLLEQL TASEYAQIVQ TAADSDRLLP
ANQPRVKRLR AIVMKLAPYS VKWNDRVKSW AWDVNAIRSR DIRVTCLPGG KVLVYGGMLD
RVRLNDDELG VLLAHGIAHA LREHARSNLG TASQTSLRAA ALPPLFGVGD PLPQALNLGA
RLQTLRYDPT DETEADVIGG DIAARAGFDP RAAITLWDKL AAATRANKTS GFIYTHPYGA
TRRQDLLNRL QDLMPLYAKA TGKRVDTLPD YAGISAQRRK VARR