| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3149 |
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| Symbol | |
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| ID | 4310631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3466596 |
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| End bp | 3468926 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638150989 |
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| Product | ABC transporter related |
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| Protein accession | YP_775039 |
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| Protein GI | 115353200 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCCC GACCTCCCGA GACCGGTGGC GGTAACGCGC CGAATCTTCC GGACACCCTC
ACCCACGACA GCCTGCTCGA TTCAGTCGCA TGGCTTTGCA CGCACTACGG TTTGGGCAGA
AGCCATGCAG TCCTTGTTTC CGGTCTTGCC AAATACGGCC CGCTGACACC ATCGCAGGCG
ATCGAGGCGC TGACGCAGGC CGGTCTTGCG GCGAAGCTGG TGGAGCGGCC GCTGACGCAG
TTGCCCGAGC ATCTGTTGCC GGCCGTGCTG TTGCGCCGGA ACGGTAGCGC GTGCGTGCTG
CTCGGCTGGC GCATTGACGA TTCGGCGGAG CAGGACGCAC GCATCCGTTA TCGCGCTGTG
CTGCCTGAAC TCGGCGATGG GCCGGTCGAA TGCACCGCCG CGGAACTGGG CGAGACCTAC
GCCGGCTACG CGATGCTCGT GAAGCCGGCG GCGAAGGTCG ACGCGCGTCC GGACGACCTG
CCGACCGAAC CAGCCGGGCA CTGGTTGCTG CGAACGCTGT GGCGCTATCG CAGCTATTAC
GCGAGCGCGG CGGTCGGCGC GTTTCTGATC AACGTGCTGG GCCTCGCCAG CGTGTTCTTT
ACGATGAATG TCTACGACCG TGTCGTTCCG AACCAGGCGT ATGTGACGCT CTGGTCGCTC
GCGATCGGCG TCGCGCTCGC AATGCTGATG GAAGCGGTGT CGCGGCACGT GCGTGCCCAT
GTGCTCGATA CCGCGGGCAA GAAGGCTGAT CTGGTGCTCG GCACCCTGCT GTTTCGGCAG
GCGCTGGCGA TCCGGATGGA GCACCGGCCG GCGTCGGCCG GCTCCTTCGC GCACCGGTTG
CGCGAGTTCG AATCGGTGCG GGACTTCGCG ACATCGGCGA CGCTGTCGGC AGTATCCGAT
CTGCCGTTCG TCTTTTTGTT CGTTGGCGTG GTGTTCGCGG TCGGTGGCCC GCTCGGCTGG
ATTCCGCTCA TGATGATCCC GCTGATCGTC GGCCTCGGCA CGATCGTGCA ATGGCCCCTC
GCGCGTGCGA TGCGCGAAAA CTTGCGTGAA GCGTCGTTGA AGCAGGGCGT GCTGATCGAG
TCGATCGACG GGCTCGAGAC GCTGAAGGCA GTCGGCGGCG AAGGCGCGAT GCGCCACCGC
TGGGAGGCGT TCAGTGCGAA GACGGCGGCC TCGTCGATGC AGTCGCGCGA GTTGTCCAGC
ATGGCGACCA GTTGTGTGTC GTTCCTGCAG CAGATGCAGA CCGTCGCGAT CGTGATCGTC
GGCGTGTACC TGATCGGCGA AGGCAAGCTC ACCCAGGGCG CGCTGATCGG CTCCGTGATG
CTGGCCGGCC GTGTGACGGC ACCGCTCGGG CAGGTCATGG GGCTTGCGCT GCGGTTTCAG
CAGGCGAAGA GCGCAATGCA TTCGCTCAAC GAACTGATGG CGATGCCGGT CGAGCACGAG
CCAGGACAGG ATTATCTGGC GCAGCCGCCG CTCAGCGGCC ATGTGAAGCT CGACGGTGTG
TCGTTCCAGT ATCCGTCGGC CGGCCTGCAG CAAAACGCGC CCGCGCTGGA TCAGATATCG
GTGGAGATCC GGCCCGGCGA GCGCGTCGCG ATACTCGGCA GGGTCGGCAG CGGGAAATCG
ACGCTGCTGC GCTTGATTGC GCGGCTTTAT CAGCCGACGG AGGGCAAGCT GCTCGCCGAT
GGGCTCGACG CCGCCCAGAT CGCACCGGCC GACTGGCGCC GAACCTTCGG CTACGTCGGC
CAGGACAGCC GGCTGTTTTA CGGTTCGCTG CGCGAGAACG TGACGATCGG CCGTCCCGAC
GTGCCGGCCA CGGAACTGCT GCGCGTGCTC GAGCTGACGG GGCTCGACGC GCTGGTCGCC
CGGCATCCGC TCGGCGCGAA TCTTCAGGTC GGCGAAAACG GCCGTGATCT GTCGGGCGGG
CAGCGCCAGC TCGTCGCGCT GGCCCGCAGC CTGATCGCGC GTCCGCGAAC ATTGTTGCTC
GACGAACCGA CGAGCGCGAT GGACTCCCAG ACGGAGTCGC AGTTCATCGA ACACTTGAAG
CATGCGACCT CCGGCCAGAC GCTGGTCGTG GTGACGCATC GCACGTCGCT GTTGGCGCTC
GTCGACCGGA TCGTGATCGT CGATCAAGGC AAGATCGTGA TGGATGGGGA AAAGGCGCGT
GTGCTGGCGG CACTGTCGGG TCAGCCCGAG GCGGATGAGC ATCCCCCGCA GCCCGAGGCG
CAGCGAAACC GTGCGCCGAA AATCCGCGTG GTCGAGCGCG GCGTGCAACC CGGTGCGTCG
CCAGCGGAAT CGAACGGCGG CGTGGTGTCG TCGGCTGCGG AGGCATCATG A
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| Protein sequence | MNARPPETGG GNAPNLPDTL THDSLLDSVA WLCTHYGLGR SHAVLVSGLA KYGPLTPSQA
IEALTQAGLA AKLVERPLTQ LPEHLLPAVL LRRNGSACVL LGWRIDDSAE QDARIRYRAV
LPELGDGPVE CTAAELGETY AGYAMLVKPA AKVDARPDDL PTEPAGHWLL RTLWRYRSYY
ASAAVGAFLI NVLGLASVFF TMNVYDRVVP NQAYVTLWSL AIGVALAMLM EAVSRHVRAH
VLDTAGKKAD LVLGTLLFRQ ALAIRMEHRP ASAGSFAHRL REFESVRDFA TSATLSAVSD
LPFVFLFVGV VFAVGGPLGW IPLMMIPLIV GLGTIVQWPL ARAMRENLRE ASLKQGVLIE
SIDGLETLKA VGGEGAMRHR WEAFSAKTAA SSMQSRELSS MATSCVSFLQ QMQTVAIVIV
GVYLIGEGKL TQGALIGSVM LAGRVTAPLG QVMGLALRFQ QAKSAMHSLN ELMAMPVEHE
PGQDYLAQPP LSGHVKLDGV SFQYPSAGLQ QNAPALDQIS VEIRPGERVA ILGRVGSGKS
TLLRLIARLY QPTEGKLLAD GLDAAQIAPA DWRRTFGYVG QDSRLFYGSL RENVTIGRPD
VPATELLRVL ELTGLDALVA RHPLGANLQV GENGRDLSGG QRQLVALARS LIARPRTLLL
DEPTSAMDSQ TESQFIEHLK HATSGQTLVV VTHRTSLLAL VDRIVIVDQG KIVMDGEKAR
VLAALSGQPE ADEHPPQPEA QRNRAPKIRV VERGVQPGAS PAESNGGVVS SAAEAS
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