| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3144 |
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| Symbol | |
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| ID | 4310626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3461455 |
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| End bp | 3462246 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638150984 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_775034 |
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| Protein GI | 115353195 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGCAC GCCGCCTGCC CAAGCCTCCC GACCTGCCGG CGTCGCTGCG ACGCCGGCGC
ATCTCCCGCA GCCGGCCGCG CGCCGGCACG CCCGTCTGGC TGTTCGATCT CGACAACACG
CTGCACCACG CATCGCACGC GATCTTTCCG GAGATCAACC GTGCGATGAC GCAGTACATC
ATCGACACGC TCCAAGTCGG GCGTGCCGAG GCCGACCGCC TGCGCACCGG CTACACGCAG
CGCTACGGCG CCGCGCTCCT CGGCCTCACG CGCCATCATC CGATCGATCC GCACGACTTC
CTGCGGGTCG TCCACACGTT TGCCGACCTG CCCGCGATGC TGCGCGCCGA GCGCGGCCTC
GCGCGCATCA TCGCCGCGCT GCCGGGTCGC AAGTTCGTGC TGACCAACGC GCCGGAGAAC
TACGCGCGCG CGGTACTGCG CGAGCTGCGC ATCGAGCGGC TGTTCGAACG CGTGATCGCG
ATCGAGCACA TGCGCGACCG GCGCACCTGG CGCGCGAAGC CCGACCACAC GATGCTGCGC
CGGGCCTTGC GTGCCGCGCA CGCGCGGCTG GCCGACGCGA TCCTCGTTGA AGATACCCGC
AGCCATCTGA AACGCTACAA GCGGCTCGGC ATCGGTACCG TATGGATCAC CGGCCACCTG
CCGGGCCATC TGCCGAGCAT CGGCCGTCCA CATTATGTCG ACCAGCGCAT TCGTTCGTTA
AAATCGCTCC GACTGGGCAC ACGATCGGGG CGACAGAAAT GCAGCCGACT TACCCGCAGG
ACCAAGCCGT AA
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| Protein sequence | MSARRLPKPP DLPASLRRRR ISRSRPRAGT PVWLFDLDNT LHHASHAIFP EINRAMTQYI
IDTLQVGRAE ADRLRTGYTQ RYGAALLGLT RHHPIDPHDF LRVVHTFADL PAMLRAERGL
ARIIAALPGR KFVLTNAPEN YARAVLRELR IERLFERVIA IEHMRDRRTW RAKPDHTMLR
RALRAAHARL ADAILVEDTR SHLKRYKRLG IGTVWITGHL PGHLPSIGRP HYVDQRIRSL
KSLRLGTRSG RQKCSRLTRR TKP
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