| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3139 |
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| Symbol | hslU |
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| ID | 4310621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3456482 |
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| End bp | 3457825 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638150979 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_775029 |
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| Protein GI | 115353190 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TGACCCCTGC CGAGATCGTC TCGGAACTCG ACAAGCACAT CATTGGTCAG
GCCAAGGCGA AGAAGGCCGT CGCGGTCGCG CTGCGCAACC GCTGGCGCCG CCAGCAGGTC
GGCGAGCCGC TGCGTCAGGA AATCACGCCG AAGAACATCC TGATGATCGG GCCGACGGGC
GTCGGCAAGA CCGAAATCGC GCGCCGCCTC GCGAAGCTCG CCGATGCGCC GTTCGTCAAG
ATCGAAGCGA CCAAGTTCAC CGAAGTCGGC TACGTCGGCC GTGACGTCGA CAGCATCGTG
CGCGACCTGA TCGAGATCTC GGTCAAGCAG ACGCGTGAAG CCGAGATGCG CAAGGTGCGC
ACCAAGGCGA CCGACCAGGC GGAAGACCGC ATCCTCGACG TCCTGCTGCC GCAACCGCGC
GCGGTCGGCT TCGGCGGCAA CGCCGATCAC GCGAACGACG ACAACAACGC GACGCGCCAG
ACCTTCCGCA AACGCCTGCG CGAAGGCCAG CTCGACGACA AGGAAGTCGA GCTCGACCTC
GAGCAGCCGT CGGCCGGCAT GGACATCATG GCGCCGCCGG GGATGGAAGA GATGACCGAG
CAGATCCGCT CGATGTTCTC GAACCTCGGC AGCGGCAAGA AGCAGCGCCG CAAGGTCAAG
ATCAAGGAAG CGCTGAAGCT GCTGACCGAC GAGGAAGCGG CGAAGATGCT CAACGACGAG
GAAGTGAAGA CGAAGGCCGT GCAGAACGTC GAGCAGAACG GCATCGTGTT CCTCGACGAA
ATCGACAAGA TCACGTCGCG CAACAACGAA GGCAGCGGCG GCGAAGTGTC ACGCCAGGGC
GTGCAGCGCG ACCTGCTGCC GCTCGTCGAG GGCACGACCG TCAACACGAA GTACGGGATG
GTGAAGACCG ATCACATCCT GTTCATCGCG AGCGGCGCGT TCCACCTCGC GAAGCCGAGC
GACCTGATCC CCGAACTGCA GGGGCGCTTT CCGATCCGCG TCGAGCTCGA CTCGCTGTCG
GTTGAAGATT TCGAGGCGAT CCTCGACGCG ACCGACGCGA GCCTCGTCAA GCAGTACCAG
GCGCTGCTCG CCACGGAAGA CGTGCAGCTC GAGTTCGCCG CGGACGGCAT CCGCCGCCTC
GCCGAGATCG CGTATGCGGT CAACGAGAAG ACCGAGAACA TCGGTGCGCG CCGGCTGTAC
ACGGTGATCG AGAAGCTGCT CGAGGAAGTG TCGTTCTCGG CCGGCAACCA CGCCGGCGAG
CGCGTGACGA TCGACGCGAA ATATGTCGAG CATGCGCTCG GCGAAGTGTC GCAAGACGAA
GACCTGTCGC GCTACGTGCT GTAA
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| Protein sequence | MSTMTPAEIV SELDKHIIGQ AKAKKAVAVA LRNRWRRQQV GEPLRQEITP KNILMIGPTG
VGKTEIARRL AKLADAPFVK IEATKFTEVG YVGRDVDSIV RDLIEISVKQ TREAEMRKVR
TKATDQAEDR ILDVLLPQPR AVGFGGNADH ANDDNNATRQ TFRKRLREGQ LDDKEVELDL
EQPSAGMDIM APPGMEEMTE QIRSMFSNLG SGKKQRRKVK IKEALKLLTD EEAAKMLNDE
EVKTKAVQNV EQNGIVFLDE IDKITSRNNE GSGGEVSRQG VQRDLLPLVE GTTVNTKYGM
VKTDHILFIA SGAFHLAKPS DLIPELQGRF PIRVELDSLS VEDFEAILDA TDASLVKQYQ
ALLATEDVQL EFAADGIRRL AEIAYAVNEK TENIGARRLY TVIEKLLEEV SFSAGNHAGE
RVTIDAKYVE HALGEVSQDE DLSRYVL
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