Gene Bamb_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3135 
Symbol 
ID4310617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3453626 
End bp3454792 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content62% 
IMG OID638150975 
Productcobalamin synthesis protein, P47K 
Protein accessionYP_775025 
Protein GI115353186 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.470512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGTT GTGCGCCCCC GCTCGTAGCG GGAGGCGCGA CGCACATCCT GGTTTTGACC 
CCGATTCACG AACCACAGGC GACCGACATG GCCACTCCCG TCACCATCCT CACCGGCTTC
CTCGGCAGCG GCAAGACGAC GCTGCTCAAG CGCATCCTGA ACGAACAGCA CGGCATGAAG
ATCGCCGTGA TCGAGAACGA GTTCGGCGAA GAGAACATCG ACAACGAGAT CCTCGTGCAG
GACTCGAACG AGCAGATCAT CCAGATGAGC AACGGCTGCA TCTGCTGCAC GATCCGCGGC
GACCTCGCCC GCGCGCTCGG CGATCTGGCC GCGAAGAAGC GCGAAGGCAA GCTCGACTTC
GACCGCATCG TGATCGAAAC CACCGGCCTC GCGAATCCGG GCCCCGTCGC GCAAACTTTC
TTCATCGACA GCGAAATCGC CGACGACTTC CTGCTCGACG CGGTCATCAC GCTCGTCGAC
GCGAAGCACG CGAACGCGCA GCTCGACGAA CACGAAGTCG TGCAGCGCCA GGTCGGCTTC
GCCGATCGCC TGTTCATCAC GAAGTCGGAC CTCGTCGACG ACCAGACCGT CGCCGGCCTC
AAGCACCGCC TGATGCACAT GAACCCGAAG GCGACGATCA AGATCGTCAA CTTCGGCGAA
GCCGACATCA AGGAAATCTT CGACCTGCGC GGCTTCAACC TGAACGCGAA GCTCGAGATC
GACCCGGATT TCCTCGCCGA AGACGACCAC GCGCACGCTC ACCACGAGCA CGGCCATGAT
CACGATCACG CCGATTGCGA CCACGATCAC GGCCAATGCG CGCACGATCA CGACCACGGC
CATCATCACC ATCACCATGC GCACCACGAC GACAAGATCA AGTCGTTCGT GTATCGCAAC
GACCGCCCGT TCGACCCGAA CAAGCTGGAA GACTTCCTCG GCGGGATCCT GCAGATCTAC
GGCGAACGGA TGCTGCGCTA CAAGGGCGTG CTGTACATGA AGGGCGTCGA TCGCAAGGTC
GTGTTCCAGG GCGTGCACCA GATGATGGGC AGCGACCTCG CCGCGAAGTG GCTGCCGGTC
GAGAAGAAGA CCAACAAGAT GGTGTTCATC GGCGTCGATC TGCCGCAGGA CCTGATCACC
GACGGCCTCG ACGCCTGCCT CGCCTGA
 
Protein sequence
MDGCAPPLVA GGATHILVLT PIHEPQATDM ATPVTILTGF LGSGKTTLLK RILNEQHGMK 
IAVIENEFGE ENIDNEILVQ DSNEQIIQMS NGCICCTIRG DLARALGDLA AKKREGKLDF
DRIVIETTGL ANPGPVAQTF FIDSEIADDF LLDAVITLVD AKHANAQLDE HEVVQRQVGF
ADRLFITKSD LVDDQTVAGL KHRLMHMNPK ATIKIVNFGE ADIKEIFDLR GFNLNAKLEI
DPDFLAEDDH AHAHHEHGHD HDHADCDHDH GQCAHDHDHG HHHHHHAHHD DKIKSFVYRN
DRPFDPNKLE DFLGGILQIY GERMLRYKGV LYMKGVDRKV VFQGVHQMMG SDLAAKWLPV
EKKTNKMVFI GVDLPQDLIT DGLDACLA