Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3127 |
Symbol | |
ID | 4310609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3445516 |
End bp | 3446289 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150967 |
Product | phytanoyl-CoA dioxygenase |
Protein accession | YP_775017 |
Protein GI | 115353178 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5285] Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCTT CATTGCAGTC GGAATCGATC CGCGCGCAAG TCGCGGAATT GCGCGAACGC GGTTTCGTCG TCGCGCGCGG CCTCGTCAGC GAAGCGCAGT GCGCGGCGCT CAAGCGCATC GCGGAGCGCC AGTTGCAGGA AGCGGCGGAG CCGATCGAGT TCGAGGCGGA TTTGCGCTAC CCGGGCGCGC CCGAGTCCAA GCATGCGCCG GGCGGCCATA CGGTGCGGCG GCTGCTGGAC GCCTATGGGC GCGATCTGGC GTTCGCCGAG CGCGCGATCG CGCCCGAAAT CGGCGCGTGG ATGCGCGAGT ACTTCGGCGA GCAGCCGGTG CTGTCGCGCA CGCATCACAA CTGCATGATG ACGAAGCACC CCGCGTACGG CAGCCTGACG GGCTGGCATC GCGACTTCCG CTACTGGTCG TTCGAACGCG CGGACATGGT GTCGGTGTGG CTCGCGCTCG GGCCGGAAAC GAATGAAAAC GGCGCGCTCT GGCTGGTGCC CGGGTCGCAC ACGGCCGAAT TCGGGTCGGA AGCGTTCGAC GACGCGAAGT TCTTCCGCAG CGACCTGCCG GAAAACCGCA AGGTGATCGA TGCGGCAACC TGCCCGCCGC TCCAGACGGG CGACGTCGTG TTCTTCCACT GCAACACGCT GCATTCGGCG GGGCAGAACC GCTCCGACCA GGTGAAGTTC TCGCTCGTCT ACACGTATCA CGGGGTGAGC AACCGGCCGG TGCCGGGCAC GCGTTCGGCG ACGAAGCCGG AAGTGCAGTT CTAG
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Protein sequence | MSSSLQSESI RAQVAELRER GFVVARGLVS EAQCAALKRI AERQLQEAAE PIEFEADLRY PGAPESKHAP GGHTVRRLLD AYGRDLAFAE RAIAPEIGAW MREYFGEQPV LSRTHHNCMM TKHPAYGSLT GWHRDFRYWS FERADMVSVW LALGPETNEN GALWLVPGSH TAEFGSEAFD DAKFFRSDLP ENRKVIDAAT CPPLQTGDVV FFHCNTLHSA GQNRSDQVKF SLVYTYHGVS NRPVPGTRSA TKPEVQF
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