| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3115 |
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| Symbol | |
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| ID | 4310807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3436207 |
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| End bp | 3437847 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150955 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_775005 |
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| Protein GI | 115353166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATACG ACTACATCAT CGTGGGCGGC GGGTCGGGCG GCTCGAGCGT CGCCAGCCGC
CTCGCCGATG CATGCCCCGA CGCGACGATC GCGCTGATCG AGGCCGGCCC GCACACGGAG
CGCAACCTGC TCGTCAACAT GCCGGTGGGG ATCGCGGCGC TCGTGCCGTT CAAGCTCGGC
ACGAACTACG GTTACGAGAC GGTGCCGCAG CCGGGCCTCG GCGGCCGTCG CGGCTACCAG
CCGCGCGGGC GCGGGATGGG CGGCTCGAGC GCGATCAACG CGATGATCTA CACGCGCGGC
CACCCGGGCG ACTACGACGA GTGGGCCCAG CTCGGCGCGA CGGGCTGGGG CTGGCAGGAC
GTGTTGCCGT ATTTCCGCCG CGCGGAAGGC AACGCGCGCG GCGCCGATGC ATGGCACGGC
GCGGACGGCC CGTTGACGGT GTCCGATCTG CGCTTTCGCA ATCCGTTCTC CGAACGATTC
ATCCAGGCCG CGCACGCGGC CGGCTATCCG CTGAACAACG ATTTCAACGG CGCGACGCAG
GAAGGCGTCG GCTTCTATCA GGTCACGCAT CGCGACGGCT CGCGCTGCAG CGTCGCGCGT
GCGTATATCT ATGGCCGCAA CCGGCCGAAC CTGCACGTGA TCACCGATGC GACGGTGCTG
CGCGTGGGCT TCGACGGCAA GCGCGCGGTC GGCGTCGTGG TGTCGCGCGA CGGGCGCGTC
GAGACGCTCG GCGCGCGGGC GGAGGTGATT CTGTCGGCCG GCGCGTTCAA TTCGCCGCAG
CTGCTGATGT GCTCGGGGAT CGGTCCGGCG GAGCAGCTGC GCCGGCACGG CATCGCGATC
GTGCAGGACG CGCCGGACGT CGGCGCCAAC CTGATCGACC ATATCGACTT CATCATCAAC
ACGCGCGTGA ATTCGTCGGA GCTGGTCGGC ATCTGCCTGC GCGGAATCGC GAAGATGACG
CCGGCGCTCG CGCGCTATTT CTCGAGCCGC ACGGGGATGA TGACGAGCAA CGTCGCGGAG
GCCGGCGGCT TCATCAAGAG CGATCCGTCG CTCGACCGAC CGGACCTGCA ACTGCATTTC
TGCACGGCGC TGGTCGACGA CCACAACCGC AAGATGCATT GGGGCTTCGG CTATTCGCTG
CACGTGTGCG CGCTGCGCCC GTTCAGCCGT GGCACGGTCG CGCTCGCGAG CGGCGATGCG
CGCGACGCGC CGCTGATCGA TCCGCGCTTC TTCAGCGATA CGCGCGATCT CGACCTGCTC
GTGCGCGGTG CGCAGGCGAT GCGCCGGATC CTGTCGCAAA CGCCGCTTGC GTCGCAAGGC
GGGCGCGAGC TGTACACGCG GGCGGACCAG AGCGAAGCCG AGCTGCGCGC GACGATCGTC
GCGCACGCCG ACACGATCTA TCACCCGGTC GGCACCTGCC GGATGGGTTC GGATGTGCGC
GCGGTCGTGG ATCCGCAACT GCGCGTGCGG GGTGTCGACG GGCTGCGGGT GGTGGACGCG
TCGGTGATGC CGACGCTGAT CGGCGGGAAC ACGAATGCGC CGTCGGTGAT GATCGGCGAA
CGCGCGGCGG ACTTCATCGT TGCGGCCCGC AAGGGCGCGG TGCCGCGCGG CGAGGCGGCC
GCGGCGGTGC ACGGCCGCTG A
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| Protein sequence | MQYDYIIVGG GSGGSSVASR LADACPDATI ALIEAGPHTE RNLLVNMPVG IAALVPFKLG
TNYGYETVPQ PGLGGRRGYQ PRGRGMGGSS AINAMIYTRG HPGDYDEWAQ LGATGWGWQD
VLPYFRRAEG NARGADAWHG ADGPLTVSDL RFRNPFSERF IQAAHAAGYP LNNDFNGATQ
EGVGFYQVTH RDGSRCSVAR AYIYGRNRPN LHVITDATVL RVGFDGKRAV GVVVSRDGRV
ETLGARAEVI LSAGAFNSPQ LLMCSGIGPA EQLRRHGIAI VQDAPDVGAN LIDHIDFIIN
TRVNSSELVG ICLRGIAKMT PALARYFSSR TGMMTSNVAE AGGFIKSDPS LDRPDLQLHF
CTALVDDHNR KMHWGFGYSL HVCALRPFSR GTVALASGDA RDAPLIDPRF FSDTRDLDLL
VRGAQAMRRI LSQTPLASQG GRELYTRADQ SEAELRATIV AHADTIYHPV GTCRMGSDVR
AVVDPQLRVR GVDGLRVVDA SVMPTLIGGN TNAPSVMIGE RAADFIVAAR KGAVPRGEAA
AAVHGR
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