Gene Bamb_3113 details

Gene Information

• Locus tag: Bamb_3113
• ID: 4310805
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3434316
• End bp: 3434774
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638150953
• Product: flagellar export protein FliJ
• Protein accession: YP_775003
• Protein GI: 115353164
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.682054
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACACG GCTTTCCCCT TCAACTGCTG CTCGACCGCG CGCAGGAAGA TCTCGACACG 
GCCACGAAGC AGCTCGGCAC CGCGCAGCGC GACCGCACCG CGGCCGCCGA ACAGCTCGAC 
GCGCTGCTGC GCTATCGCGA CGAATACCAC GCGCGCTTTT CGCAGTCCGC GCAGCACGGG 
ATGCCGGCCG GCAACTGGCG CAATTTCCAG GCGTTCATCG ATACGCTCGA CGCGGCGATC 
GCGCAGCAGC GCACCGTGCT GGCCGCGGCC GAACTGCGCA TCGACGAGGC GCGTCCGAAC 
TGGCAACAGA AGAAACGCAC CGTCGGCTCA TACGAAACCC TGCAGGCGCG CGGCGTCGCG 
CAGGAAACGC AGCGTGCCGC GAAGCGCGAA CAGCGCGACG CCGACGAACA CGCCGCGAAG 
ATTCTGCGCA TGCGGGCCGA CGCGGCCCGC TCGGCGTAA 

 

Protein sequence

MAHGFPLQLL LDRAQEDLDT ATKQLGTAQR DRTAAAEQLD ALLRYRDEYH ARFSQSAQHG 
MPAGNWRNFQ AFIDTLDAAI AQQRTVLAAA ELRIDEARPN WQQKKRTVGS YETLQARGVA 
QETQRAAKRE QRDADEHAAK ILRMRADAAR SA