| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3108 |
|---|
| Symbol | |
|---|
| ID | 4310800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3428757 |
|---|
| End bp | 3429116 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638150948 |
|---|
| Product | flagellar hook-basal body complex subunit FliE |
|---|
| Protein accession | YP_774998 |
|---|
| Protein GI | 115353159 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1677] Flagellar hook-basal body protein |
|---|
| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGGG ACAGCATGAC TGCCAACGTC AGCGGAATCG GTTCGGTGTT GCAACAGATG
CAGGCGATGG CCGCGCAGGC GGGCGGCGGC GTCGCGAGCC CGACGGCGGC GCTCGCCGGC
TCGGGCGCCG CGACGGCCGG CACGTTCGCG AGCGCGATGA AGGCGTCGCT CGACAAGATC
AGCGGCGACC AGCAGCACGC GCTCGGCGAG GCGCAGGCGT TCGAGGTCGG CGCGGCGAAC
GTGTCGCTGA ACGACGTGAT GGTCGACATG CAGAAGGCCA ACATCGGCTT CCAGTTCGGG
CTCCAGGTCC GCAACAAGCT CGTGAGCGCG TACAACGACA TCATGCAGAT GTCGGTGTGA
|
|---|
| Protein sequence | MCGDSMTANV SGIGSVLQQM QAMAAQAGGG VASPTAALAG SGAATAGTFA SAMKASLDKI
SGDQQHALGE AQAFEVGAAN VSLNDVMVDM QKANIGFQFG LQVRNKLVSA YNDIMQMSV
|
|---|
| |