Gene Bamb_3103 details

Gene Information

• Locus tag: Bamb_3103
• ID: 4310795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 3425085
• End bp: 3425780
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638150943
• Product: PepSY-associated TM helix domain-containing protein
• Protein accession: YP_774993
• Protein GI: 115353154
• COG category: [S] Function unknown
• COG ID: [COG3295] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.775507
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTCCCG CGCACGTTAC CGTGCCGCAT CCGGCCGCAC GTCCGCTGAG CGACGCCGAA 
CTGGCGGCGC GCCGCCAGCG TTCGCGCCGC GCGACCTTCA TCAAATGGCT GCGCAAGGTG 
CACGGCTGGG TCGGGCTATG GGGCGCGGTG CTCGGGCTGC TGTTCGGCGT GACGGGCGTG 
CTGCTCAACC ACCGTGCGCC GCCGCTGAAG ATCTCGACCG GCGAACCGCA GGTCGAGCAG 
ATGCAGATCG CGTTGCCGGA CCCGGTGCCG AAGTCGCCCG CGGCGATGAC GAAGTGGCTG 
CAGCACGAAC TGCACTTCGA CGGCCGGCCG GGCCGTGTGC GCAAGGAACC CGCGCAGCCG 
GTCGCGTGGG GCGACAAGCG CGTGATGCAG CCCGAGCACT GGCAGATGGG CCTGTTCGGG 
CCGCACCAGA ACCTGCAGGC CGAATATTGG GTCGGCAACG GCTACGTGTC GGTGAAGCGC 
ACCGGCAACA CGTTCCTGAC GACGCTGAAC AACCTGCATC GCGGCGTCGG CATGAATCTC 
GGCTGGGTGC TGCTGATGGA CACGATCGCG GGTTCGCTGA TCCTGTTGTC GCTGACGGGC 
GTGCTGCTGT GGACGGAGCT GAACAAGCGC CGCACGGTCG GCGTCGTGCT GGTGGTCGGC 
TCGGTCGCCG CGGCGCTCGC CGCGGGCCTC GCCTGA 

 

Protein sequence

MPPAHVTVPH PAARPLSDAE LAARRQRSRR ATFIKWLRKV HGWVGLWGAV LGLLFGVTGV 
LLNHRAPPLK ISTGEPQVEQ MQIALPDPVP KSPAAMTKWL QHELHFDGRP GRVRKEPAQP 
VAWGDKRVMQ PEHWQMGLFG PHQNLQAEYW VGNGYVSVKR TGNTFLTTLN NLHRGVGMNL 
GWVLLMDTIA GSLILLSLTG VLLWTELNKR RTVGVVLVVG SVAAALAAGL A