Gene Bamb_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3093 
Symbol 
ID4310785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3414470 
End bp3415579 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content71% 
IMG OID638150933 
ProductFAD dependent oxidoreductase 
Protein accessionYP_774983 
Protein GI115353144 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGA CGGATTGTGT GGTGATCGGC GCAGGTGTGG TCGGTCTTGC GATTGCGCGT 
GAGCTGGCCG CGCGCGGGCG CGAAACGATC GTGCTCGAGG CGGCCGACGC GATCGGCACG
GGCACGAGTT CGCGCAACAG CGAGGTGATT CACGCGGGGC TCTACTACCC GCGCGGCACG
CTGAAGGCGA TGTCGTGCGT GCGCGGGCGC GAACTACTGT ACGAATTCTG CGAAACGCAT
CATGTGCCGC ACCGGCGCAT CGGCAAGCTG ATCGTCGCGA CGAGCGTCGC GCAGGTGAAG
CAGTTGAAGG CGCTCGCCGC GCGCGCGGCG GAAAACGGCG TGCTCGACCT GATGCCGCTC
ACGCGCGCCG AGGCGCAGAC GCTCGAGCCC GCGCTCGACT GCGTGGAAGC GGTGTTCTCG
CCGTCCACCG GCATCGTCGA CAGCCACCAG CTGATGCTCG CGCTGCTCGG CGACGCGCAG
CGCAACGGTG CGACGTGCGT GCTGAAATCC CCGGTCGAGT CGATCGACGT GCTGCGCGGC
GGCCGCTTCG TCGTGCGCAC CGGTGGCGAC GTGCCGACCG AAATCGAGGC GGCGTGCGTG
ATCAACAGCG CGGGTCTCGG CGCGCAGGCG CTCGCGCGCC GCACGCGCGG CCTCGACCCG
CACTGGGTGC CGCCGCTCTA TCTCGCGCGC GGCAACTACT TCAGCCTGTC CGGGCGCGCG
CCGTTCTCGC ACCTCGTGTA TCCGATGCCC GACCGGGGCG GGCTCGGCAT CCACCTGACG
CTCGACCTGG CCGGGCAGGC GCGCTTCGGC CCGGACGTCG AATGGGTCGA TGCGCTGCGC
TACGAAGTCG ATCCGGCGCG CGCGCAGGCG TTCTACGCGT CGATCCGCGC ATACTGGCCG
GAACTGCCCG ACGACGCGCT GCAGCCGGCC TACTCCGGGA TCCGTCCGAA ACTCGCGGGG
CCGGGCGAGC CGCCGGCCGA TTTCATCGTG CAGGGCGGCG CGCAGCACGG CGTGCGCGGG
CTCGTGAACC TGTTCGGCAT CGAGTCGCCG GGGCTGACGG CGTCGCTCGC GCTCGCGCAG
CGCGTCGGCG ACATGACGTC GAACGCGTGA
 
Protein sequence
MEQTDCVVIG AGVVGLAIAR ELAARGRETI VLEAADAIGT GTSSRNSEVI HAGLYYPRGT 
LKAMSCVRGR ELLYEFCETH HVPHRRIGKL IVATSVAQVK QLKALAARAA ENGVLDLMPL
TRAEAQTLEP ALDCVEAVFS PSTGIVDSHQ LMLALLGDAQ RNGATCVLKS PVESIDVLRG
GRFVVRTGGD VPTEIEAACV INSAGLGAQA LARRTRGLDP HWVPPLYLAR GNYFSLSGRA
PFSHLVYPMP DRGGLGIHLT LDLAGQARFG PDVEWVDALR YEVDPARAQA FYASIRAYWP
ELPDDALQPA YSGIRPKLAG PGEPPADFIV QGGAQHGVRG LVNLFGIESP GLTASLALAQ
RVGDMTSNA