Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3090 |
Symbol | |
ID | 4310782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3410565 |
End bp | 3412193 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638150930 |
Product | extracellular solute-binding protein |
Protein accession | YP_774980 |
Protein GI | 115353141 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATACA ACCGTCTGTT GCACACCCTG CGTGTTACCG CCATTGCAGG CGTGGCAGCG GCATCGCTCG GCGTCGCGGG TTCTGCATTC GCACAGATCC CGAACAAAAC GCTCGTCTAC TGCTCAGAAG GCAGCCCGGC GGGTTTTGAT TCCGCGCAAT TCACGACCGG CGTCGATTTC ACGGCCGCCA CGTTCACCGT CTACAACCGA CTCGTCGAAT TCGAGCGCGG CGGCACGAAG GTCGAGCCGG GCCTCGCGGA GAAGTGGGAC GTCTCGTCCG ACGGCAAGGT GTACACGTTC CACCTGCGTC ATGGCGTGAA GTTCCACACG ACCGACTTCT TCAAGCCGAC GCGCGAATTC AACGCGGACG ACGTCGTGTT CTCGTTCGAG CGCATGCTCG ATCCGAACCA GGCGTTCCGC AAGGCCTACC CGGTGTCGTT CCCGTACTTC ACCGACATGG GCCTCGACAA GCTGATCACG AAGATCGAGA AGGTCGATCC GTACACTGTG AAGTTCACGC TGGCCGAACC GAACGCGCCG TTCATCCAGA ACATGGCGAT GGAATTCGCG TCGATCCTGT CGGCCGAATA CGGCGAGCAG CTGATGAAGG CCGGCAAGGC CGCCGACATC AACCAGAAGC CGGTCGGCAC GGGCCCGTTC ATCTTCCGCA GCTACACGAA GGACGCGACG ATCCGTTTCG ACGGGAATCC TGACTATTGG AAGAAGGGTG CCGTGAAGCT GTCGAAGCTG ATCTTCTCGA TCACGCCCGA CCCGGGCGTG CGCGTGCAGA AGATCAAGCG CAATGAATGC CAGGTGATGA GCTATCCGCG TCCGGCCGAC ATCGCGACGC TGAAGGCCGA CTCGGGCATC GACATGCCGT CGCAGCCGGG CTTCAACCTC GGCTACCTCG CGTACAACGT CGAGCACAAG CCGGTCGACA AGCTCGAGGT GCGTCAGGCG CTCGACATGG CGATCAACAA GAAGGCGATC CTCGAATCCG TCTATCAGGG CGCGGGCCAG GCCGCCACCG CGCCGGTGCC ACCGACCCAA TGGTCGTACG ACAAGAACCT GAAGATGCCC GCGTACGACA CCGCGAAGGC GAAGGCGCTG CTCGCGAAGG CCGGCTTCCC GAACGGTTTC GACATCACGC TGTGGGCCAT GCCGGTGCAG CGCGCGTACA ACCCGAACGC CCGCCTGATG GCCGAGATGA TCCAGGCCGA CTGGGCGAAG ATCGGCGTGA AGGCGAAGAT CGTCACGTAC GAGTGGGGCG AGTACATCAA GCGCGCGCAC TCGGGCGAGC AGGACACGAT GCTGATCGGC TGGACGGGCG ACAACGGCGA CCCGGACAAC TGGCTCGGCA CGCTGCTCGG CTGCGAGGCG ATCAAGGGCA ACAACTTCTC GCACTGGTGC TACAAGCCGT TCGACGAGCT GGTCCAGAAG GGCCGCACGA CGACGGGCCA GGACGCGCGC ACGAAGATCT ACACGCAGGC TCAGCAGATC TTCGCGCAGC AGCTGCCGTT CTCGCCGATC GCGAACTCGA CGGTCTATCA GCCGGTACGC AAGAACGTGG TCGACATGCG CATCGAGCCG CTCGGCTATG CCCGCTTCGA CGGTGTCGGC GTGAAGTAA
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Protein sequence | MEYNRLLHTL RVTAIAGVAA ASLGVAGSAF AQIPNKTLVY CSEGSPAGFD SAQFTTGVDF TAATFTVYNR LVEFERGGTK VEPGLAEKWD VSSDGKVYTF HLRHGVKFHT TDFFKPTREF NADDVVFSFE RMLDPNQAFR KAYPVSFPYF TDMGLDKLIT KIEKVDPYTV KFTLAEPNAP FIQNMAMEFA SILSAEYGEQ LMKAGKAADI NQKPVGTGPF IFRSYTKDAT IRFDGNPDYW KKGAVKLSKL IFSITPDPGV RVQKIKRNEC QVMSYPRPAD IATLKADSGI DMPSQPGFNL GYLAYNVEHK PVDKLEVRQA LDMAINKKAI LESVYQGAGQ AATAPVPPTQ WSYDKNLKMP AYDTAKAKAL LAKAGFPNGF DITLWAMPVQ RAYNPNARLM AEMIQADWAK IGVKAKIVTY EWGEYIKRAH SGEQDTMLIG WTGDNGDPDN WLGTLLGCEA IKGNNFSHWC YKPFDELVQK GRTTTGQDAR TKIYTQAQQI FAQQLPFSPI ANSTVYQPVR KNVVDMRIEP LGYARFDGVG VK
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