| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3089 |
|---|
| Symbol | |
|---|
| ID | 4310781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3409437 |
|---|
| End bp | 3410447 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638150929 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_774979 |
|---|
| Protein GI | 115353140 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACTT TCGTGTTGCG CCGCGTGGGC ATGGTGATCC CGACCTTCAT CGGCATCACC
ATCCTGGCGT TTGCGCTGAT TCACCTGATA CCGGGCGACC CCATCGAAGT GATGATGGGC
GAGCGCGGCG TCGATCCCGC GATGCATGCG GAGGCAATGA AACGGCTCGG CCTCGACCAG
CCGCTGCCGC TGCAGTACAT CCACTACATC GGCCGTGCGC TGCACGGCGA CCTCGGCACG
TCGATCATTA CCAACACGAG CGTCGCGGGC GAATTCTTCG CGCGCTTCCC GGCGACGGTC
GAGCTGTCGC TGTGCGCGCT CGTGTTCGCG CTCGCGGTCG GCCTGCCGGC CGGCGTGATC
GCCGCGCTGC GACGCGGCTC GGCCATCGAT CACGGCGTGA TGGGCACCGC GCTCACCGGC
TACTCGATGC CGATCTTCTG GTGGGGGCTG ATCCTCATCA TGGTGTTTTC GTCGTATCTC
GGCTGGACGC CCGTGTCGGG GCGCATCGCG GTCGAATACG ACTTCCCGCA TCCGACGGGC
TTCATGCTGA TCGACGCGTT GTTCGCGCCG GACGAAGGCG CGTTCAAGTC GGCGGTCAGC
CACCTGATCC TGCCCGCGAT CGTGCTCGGC ACGATCCCGC TCGCGGTGAT CGCGCGGATG
ACGCGCTCGT CGATGCTCGA AGTGCTGCGC GAGGACTACA TCCGCACCGC CCGCGCGAAG
GGGCTGTCGC CCGCGCGCGT GGTCGTCGTG CATGCGCTGC GCAACGCGCT GATCCCGGTC
GTCACCGTGA TCGGCCTGCA GATCGGCACG CTGCTCGCGG GCGCCGTGCT GACCGAGACG
CTCTTTTCGT GGCCCGGTGT CGGCAAGTGG CTGATCGATG CGATCGGCCG TCGCGACTAT
CCGGTCGTCC AGGGCGGCAT CCTGCTGATC GCGACGCTCG TGATCGTCGT GAACCTGGTC
GTCGACCTGC TGTACGGCGT GCTGAATCCG CGCATCCGCC ACACGAGGTA A
|
|---|
| Protein sequence | MFTFVLRRVG MVIPTFIGIT ILAFALIHLI PGDPIEVMMG ERGVDPAMHA EAMKRLGLDQ
PLPLQYIHYI GRALHGDLGT SIITNTSVAG EFFARFPATV ELSLCALVFA LAVGLPAGVI
AALRRGSAID HGVMGTALTG YSMPIFWWGL ILIMVFSSYL GWTPVSGRIA VEYDFPHPTG
FMLIDALFAP DEGAFKSAVS HLILPAIVLG TIPLAVIARM TRSSMLEVLR EDYIRTARAK
GLSPARVVVV HALRNALIPV VTVIGLQIGT LLAGAVLTET LFSWPGVGKW LIDAIGRRDY
PVVQGGILLI ATLVIVVNLV VDLLYGVLNP RIRHTR
|
|---|
| |