Gene Bamb_3080 details

Gene Information

• Locus tag: Bamb_3080
• ID: 4310772
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3400924
• End bp: 3401532
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638150920
• Product: 5-formyltetrahydrofolate cyclo-ligase
• Protein accession: YP_774970
• Protein GI: 115353131
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0212] 5-formyltetrahydrofolate cyclo-ligase
• TIGRFAM ID: [TIGR02727] 5,10-methenyltetrahydrofolate synthetase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCACG AATTGAGCGA AAGCATAGCA TGCAACCCTG TGCCGAACCC GAAGGTTGCA 
CTGCGTAAAA CGCTGGCCGG CGCGCGTCGC GACGCCGCGT CGCAGCCCGC CGCGAACGCC 
GCGCTCGACG CGCGCCTGCG CGCGTTGCTC GAACGCCTCG CGCCGCGCAC GGTCGGCTTC 
TACTGGCCGC TGCCGGGCGA ATTCGACGCG CGCGACGCGG TGCTCGCGTG GTCCGCGGCC 
GGCAGCGGCC GCCGTGCCGC GCTGCCGGTG ATCGGCGAGC GTCACACACC GCTCGCGTTC 
CATGCGTGGG ATGCGCACAC GCCGATGCGC GAAGGGCATC ACCGGATTCC GGAGCCGGCG 
TCGGGGGTCG TCGTCGTGCC CGACCTGTTG CTGATTCCGT GTGTGGGATT CGATCTGGAG 
CGCTACCGGC TCGGCTATGG CGGCGGCTAC TACGACCGCA CGCTCGCGGT GTGGCCGGGC 
GACACGCTGC CGGTGACGGT CGGCATCGCC TATGAAGCGT GCCGCGTCGA TGCGCTGCCG 
GCCGAGGCGC ACGATCTCGC GATGCGCTGG ATCGTCACCG ACGCCGCGCT TTACCCGGCC 
GCCGGATGA 

 

Protein sequence

MEHELSESIA CNPVPNPKVA LRKTLAGARR DAASQPAANA ALDARLRALL ERLAPRTVGF 
YWPLPGEFDA RDAVLAWSAA GSGRRAALPV IGERHTPLAF HAWDAHTPMR EGHHRIPEPA 
SGVVVVPDLL LIPCVGFDLE RYRLGYGGGY YDRTLAVWPG DTLPVTVGIA YEACRVDALP 
AEAHDLAMRW IVTDAALYPA AG