Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3078 |
Symbol | |
ID | 4310770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3397734 |
End bp | 3398693 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638150918 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_774968 |
Protein GI | 115353129 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCGCC AGACCGTCGC GCTGCTGGGC GGCACCGGCT TCATCGGCAG CCGGCTCGTC AATGCGCTGA TCGACGCCGG CAAGCATGTG AGGATTGGCA CGCGGCGGCG CGACCACGCG CGCCACCTGC AGATGCTGCC GGTCGAGATC GTCGAGCTCG ATGCGCTCGA CACGCGCACG CTGGCCCGGT TCGTCGCCGG CGCGCACGCA GCCATCAATC TCGTCGGCGT GCTGCACGAC GGCCGCGGCA CGCCATACGG GCCCGGCTTC GAGCGCGCGC ACGTCGCGCT GCCGGCCGCG CTGGCCGCCG CATGCGTCGA AGTCGGCGTG CAGCGCGTGC TGCACATGAG CGCGCTCGGC GCCGATTCGC ACGGCGCGAG CATGTACCAG CGCTCGAAAG GCGACGGCGA GGCCGCGCTG CACGCGGTCG CGGCGACCGA TTCGCTCGCG CTGACGATCT TCCGCCCGTC GGTCGTGTTC GGCCCCGGCG ACACATTCCT CAACACATTC GCGAACCTGC AGCGCACGCT GCCGGTGCTG CCGCTCGCGA TGCCCGACGC GCGTTTCCAG CCGGTGTTCG TCGGTGACGT CGTAACCGCG TTCGTCAACA CGCTCGATCT CACGGCCGCG CACGGCAAAA CCTACGAGCT CGGCGGTCCG ACCGTCTATA CGCTCGAGCA GCTGGTGCGC TATTGCGGCA CGCTGGTCGG CCGGCAGGCA CGCATCGTGC GGCTGTCCGA CGCGCTTGCG CAGCTGCAGG CGCGCGTGTT CGAATGCCTG CCCGGCGAGC CGATGATCAC GCGCGACAAT CTCGCGTCGA TGTCGGTGCC CAACGTGCTG TCAGGGCCGC TCGCGCCGGA ACTCGGGCTG TCGCCCGCGA GTCTCGAGAG CATCGCGCCC GCGTATCTCG GTGACGGCGC GCAGCGCTCC CGCTTCGACT GGTTCCGCTC GCGCCGCTAG
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Protein sequence | MDRQTVALLG GTGFIGSRLV NALIDAGKHV RIGTRRRDHA RHLQMLPVEI VELDALDTRT LARFVAGAHA AINLVGVLHD GRGTPYGPGF ERAHVALPAA LAAACVEVGV QRVLHMSALG ADSHGASMYQ RSKGDGEAAL HAVAATDSLA LTIFRPSVVF GPGDTFLNTF ANLQRTLPVL PLAMPDARFQ PVFVGDVVTA FVNTLDLTAA HGKTYELGGP TVYTLEQLVR YCGTLVGRQA RIVRLSDALA QLQARVFECL PGEPMITRDN LASMSVPNVL SGPLAPELGL SPASLESIAP AYLGDGAQRS RFDWFRSRR
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