Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3076 |
Symbol | cca |
ID | 4310768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3395793 |
End bp | 3397034 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638150916 |
Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
Protein accession | YP_774966 |
Protein GI | 115353127 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCT ACGCAGTAGG CGGAGCGATC CGCGACGACT TGCTCGGCGT GCCGGTGCAG GACCGCGACT ACGTGGTGGT GGGCGCGACG CCCGAGCAGA TGGTCGCCCA GGGCTTCCGG CCGGTCGGCA AGGATTTCCC GGTGTTCCTG CATCCGGACA CGCAGGAGGA ATACGCGCTC GCGCGCACCG AGCGCAAGAC GGCCGCCGGC TATCACGGCT TCCAGTTCTA CTTCGCGCCG GACGTGACGC TCGACGAGGA TCTCGCGCGG CGCGACCTGA CGATCAACGC GATGGCGCGC GAAGTGAGCC CGGAAGGCGC GCTGGTCGGG CCGGTGATCG ATCCGTTCGA CGGACAGGCC GACCTGCATG CACGCGTGTT CCGGCACGTG GGCGACGCGT TCGTCGAGGA TCCAGTGCGG ATCCTGCGGA TCGCGCGTTT TGCCGCGCGC TTCGCGGATT TCACGGTCGC GGACGACACC CTCGCGCTGA TGCGGCGCAT GGTCGACGCC GGCGAAGCGG ACGCGCTGGT GGCCGAACGC GTGTGGCAGG AAATCGCGCG CGGGCTGATG GAGGCGAAAC CGTCGCGGAT GTTCGCGGTG CTGCGCGAAT GCGGCGCGCT CGCGCGCGTC CTGCCCGAGG TCGACGCGCT GTGGGGCGTG CCGCAGCGCG CCGACTACCA CCCGGAAGTC GATACGGGCG TGCACGTGAT GATGGTCGTC GACTATGCGG CGAAGCAGGG CTACTCGCTG CCGGTGCGCT TCGCGGCGCT CACGCACGAT CTCGGCAAGG CGACGACGCC CGCCGACGTG CTGCCGCGCC ATGTCGGCCA CGAAGGCCGC AGCGTCGAGC TCATCAAGCC GTTGTGCGAG CGGCTGCGCG TGCCGAACGA ATGTCGCGAT CTGGCGCTGG TGGTCGCGCG CGAGCACGGC AACCTGCATC GCGTGATGGA AATGGGCGCG GCCGCGCTGG TGCGGTTCTT CGAGCGCAGC GACGCGTTGC GCAAGCCGGC GCGCTTCGCG GAAATGCTGC AGGCGTGCGA ATCGGATGCC CGCGGCCGGC TCGGGCTCGA CACGCAGCCG TATCCGCAGG CCGAGCGGCT GCGCGTGGCG CTGGTGGCGG CGCGCAGCGT CGACGCGGGC GCGATCGCGC GCGGTGTCGG CGACGATGTG ATGCAGATCA AGGACGCCGT GCATCGCGCA CGGGTCGAGG CCGTCAAGCA GGCGCTGGCG ATCGGCGAAT AG
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Protein sequence | MNIYAVGGAI RDDLLGVPVQ DRDYVVVGAT PEQMVAQGFR PVGKDFPVFL HPDTQEEYAL ARTERKTAAG YHGFQFYFAP DVTLDEDLAR RDLTINAMAR EVSPEGALVG PVIDPFDGQA DLHARVFRHV GDAFVEDPVR ILRIARFAAR FADFTVADDT LALMRRMVDA GEADALVAER VWQEIARGLM EAKPSRMFAV LRECGALARV LPEVDALWGV PQRADYHPEV DTGVHVMMVV DYAAKQGYSL PVRFAALTHD LGKATTPADV LPRHVGHEGR SVELIKPLCE RLRVPNECRD LALVVAREHG NLHRVMEMGA AALVRFFERS DALRKPARFA EMLQACESDA RGRLGLDTQP YPQAERLRVA LVAARSVDAG AIARGVGDDV MQIKDAVHRA RVEAVKQALA IGE
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