| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3058 |
|---|
| Symbol | |
|---|
| ID | 4310540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3376407 |
|---|
| End bp | 3377711 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638150898 |
|---|
| Product | uracil-xanthine permease |
|---|
| Protein accession | YP_774948 |
|---|
| Protein GI | 115353109 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.507498 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT CCTACTTCCC GCGCTGGCGG GTGCAATCGA CCGGCGCGTC GCGCGTGGTC
GGCCCCGACG AACGCCTCGC GTGGCCGCAG ATGGTCGCGA TGGGCGTGCA GCACGTCGTC
GCGATGTTCG GCTCGACCGT GCTCGCGCCG CTGCTGATGG GCTTCGACCC GAACCTGTGT
ATCTTCATGT CGGGCATCGG CACGCTGCTG TTCTTCGTGC TGGTCGGCGG CCGCGTGCCG
AGCTACCTCG GCTCGAGCTT CGCGTTCATC GGCCTCGTGA TCGCGGTGAC GGGGTACGGC
GGCAGCGGCC CGAACCCGAA CATCGCGGTC GCGCTCGGCG GGATCGTCGC GTGCGGCGTC
GTGTACGTCG CGCTCGGCGC GCTGGTGCAG GCGATCGGCA CGCGCTGGAT CGAGACGCTG
ATGCCGCCCG TCGTCACCGG CGCGGTGGTC GCGGTGATCG GGCTGAACCT CGCGCCGATC
GCGGTCAAGG GCGTGTCGGC TTCGACGTTC GACTCGGTGA TGGCGCTCGT CACGGTGCTG
TGCGTGGGCG GCGTCGCGGT GTTCGCGCGC GGGATGATGC AGCGCCTGCT GATCCTCGTC
GGGCTCATGA TCGCGTACGC GCTCTACGCG ATCGCGACCA ACGCGATGGG CCTCGGCAAG
CCGATCGATT TCTCGATCGT CGCGCATGCC GCGTGGTTCG GCGTGCCGGC TTTCCGGGCG
CCCGTGTTCG ATCCGCACGC GATGCTGATG CTCGCGCCGA TCGCGGTGAT CCTCGTCGCC
GAGAACCTCG GCCACATCAA GGCCGTCAGC GCGATGACGG GCCACAACCT CGACCGCTAC
GTCGGCCGCG CGTTCATCGG CGACGGGCTC GCGACGATCG TGTCGGGCAG CGTCGGCGGC
ACGGGCGTGA CCACCTACGC GGAGAACATC GGCGTGATGG CCGTCACGCG GATCTATTCG
ACGCTGGTGT TCGCGGTCGC CGCGCTGATC GCGATCGGGC TGGGCTTCTC GCCGAAGTTC
GGCGCGGTGA TCCAGACGAT TCCGGGCCCG GTGCTCGGCG GCGTGTCGAT CGTCGTGTTC
GGGCTGATCG CGGTGACGGG CGCGCGGATC TGGGTCGTCA ACAAGGTCGA CTTCTCCGAC
AACCGCAACC TGATCGTCGC GGCCGTCACG CTGGTGCTCG GCGCCGGCGA CTTCTCGCTG
AAGTTCGGCG GCTTCGGGCT CGGCGGGATC GGCACCGCGA CGTTCGGCGC GATCATCCTG
TACGCGATCC TGCGCAAGGA AAAGGAACCG GGGCCGGTGG TTTGA
|
|---|
| Protein sequence | MSDSYFPRWR VQSTGASRVV GPDERLAWPQ MVAMGVQHVV AMFGSTVLAP LLMGFDPNLC
IFMSGIGTLL FFVLVGGRVP SYLGSSFAFI GLVIAVTGYG GSGPNPNIAV ALGGIVACGV
VYVALGALVQ AIGTRWIETL MPPVVTGAVV AVIGLNLAPI AVKGVSASTF DSVMALVTVL
CVGGVAVFAR GMMQRLLILV GLMIAYALYA IATNAMGLGK PIDFSIVAHA AWFGVPAFRA
PVFDPHAMLM LAPIAVILVA ENLGHIKAVS AMTGHNLDRY VGRAFIGDGL ATIVSGSVGG
TGVTTYAENI GVMAVTRIYS TLVFAVAALI AIGLGFSPKF GAVIQTIPGP VLGGVSIVVF
GLIAVTGARI WVVNKVDFSD NRNLIVAAVT LVLGAGDFSL KFGGFGLGGI GTATFGAIIL
YAILRKEKEP GPVV
|
|---|
| |