Gene Bamb_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3042 
Symbol 
ID4310524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3358731 
End bp3360164 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content66% 
IMG OID638150882 
Productputative aminotransferase 
Protein accessionYP_774932 
Protein GI115353093 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTACC GCAACGAATC AGCGTGGATC CAGCCGGCCG CACCGGCCGT CGCACCGCGC 
ACGACGCAGG CCCGCTCGAC CGCCGAATAC CGCGCGCTCG ACGCCGCACA CCACATTCAC
CCGTTCTCGG ACATGGGCGC GCTCAATCGC GCGGGCAGCC GCGTGATCGT GAAGGCCGAC
GGCGTCTACC TGTGGGACTC CGACGGCAAC AAGGTGATCG ACGGGATGGC CGGCCTCTGG
TGCGTGAACG TCGGCTACGG CCGCAAGGAA CTCGCCGACG CCGCGTATCG CCAGCTGCAG
GAACTGCCGT TCTACAACAC GTTCTTCAAG ACCACGCACC CGCCGATCAT CGAACTGTCG
GCGCTGCTCG CCGAAGTCAC GCCCGCAGGC TTCAATCACT TCTTCTATTG CAACAGCGGC
TCGGAAGGCA ACGACACCGT GCTGCGCGTC GTGCACCAGT ACTGGCGCGT GCAGGGCCAG
CCGCAGAAGA AATACGTGAT CTCGCGCAAG AACGGTTACC ACGGCTCGAC GATCGCGGGC
GGCACGCTCG GCGGGATGGG CTACATGCAC GAGCAGATGC CGTCGAAGGT CGAGCACATC
GTGCACATCG ACCAGCCGTA TTTCTTCGGC GAAGCGCAAG CCGGCGAGAC GCCCGAAGCG
TTCGGCCTCG CCCGTGCGCA GCAGCTCGAG GCGAAGATCC TCGAACTCGG CGCGGAGAAC
GTCGCGGCGT TCATCGGCGA GCCGTTCCAG GGCGCCGGCG GCGTGATCTT CCCGCCGTCG
ACGTACTGGC CGGAAATCCA GCGGATCTGC CGCAAGTACG ACATCCTGCT CGTCGCCGAC
GAAGTGATCG GCGGCTTCGG CCGCACCGGC GAATGGTTCG CGCACCAGCA CTTCGGCTTC
GAGCCGGACC TGATCACGAT GGCCAAGGGC CTGACGTCGG GTTACGTGCC GATGGGTGCG
GTCGGGATTC ACGAGCGCGT CGCGCGGCCG ATCATCGACA ACGGCGAATT CAATCACGGC
CTGACCTACT CGGGGCATCC GGTGGCGGCA GCCGTCGCGG TTGCGAACCT GAAGCTGCTG
CGCGACGAAG GAATCGTCGA GCGCGTGAAG AACGACACGG GCCCGTACTT CCAGGCGCTG
ATGCGCGAGA CCTTCGCGCG TCACCCGATC GTCGGCGAGG TGCACGGCCA CGGCCTCGTC
GCGAGCCTGC AGCTCGCCGA AGCGCCGGCC GAGCGTCGGC GCTTCGCGAA CGGCGGCGAC
GTCGGCACGA TCTGCCGCGA CTTCTGCTTC AACGGCAACC TGATCATGCG CGCGACCGGC
GACCGGATGC TGCTGTCGCC GCCGCTCGTG ATCTCGCGTC AGGAAATCGA TGAACTCGTA
TCGAAGGCGA AGAAGGCCGT CGATGCGACC GCCCAGCAAC TGGGCCTTTC GTAA
 
Protein sequence
MTYRNESAWI QPAAPAVAPR TTQARSTAEY RALDAAHHIH PFSDMGALNR AGSRVIVKAD 
GVYLWDSDGN KVIDGMAGLW CVNVGYGRKE LADAAYRQLQ ELPFYNTFFK TTHPPIIELS
ALLAEVTPAG FNHFFYCNSG SEGNDTVLRV VHQYWRVQGQ PQKKYVISRK NGYHGSTIAG
GTLGGMGYMH EQMPSKVEHI VHIDQPYFFG EAQAGETPEA FGLARAQQLE AKILELGAEN
VAAFIGEPFQ GAGGVIFPPS TYWPEIQRIC RKYDILLVAD EVIGGFGRTG EWFAHQHFGF
EPDLITMAKG LTSGYVPMGA VGIHERVARP IIDNGEFNHG LTYSGHPVAA AVAVANLKLL
RDEGIVERVK NDTGPYFQAL MRETFARHPI VGEVHGHGLV ASLQLAEAPA ERRRFANGGD
VGTICRDFCF NGNLIMRATG DRMLLSPPLV ISRQEIDELV SKAKKAVDAT AQQLGLS