Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3014 |
Symbol | |
ID | 4310601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3332494 |
End bp | 3333456 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638150854 |
Product | LysR family transcriptional regulator |
Protein accession | YP_774904 |
Protein GI | 115353065 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCC TCGTCAGCAT GAATGTGTTT CGCTACGTCG TCGAAGTGGG CAGCTTCGTC GGCGCGGCGG AGCGCATGCA GATGTCGGCC GCGATGGCGA GCAAGCACGT GATGCATCTC GAGCAGCAGC TCGGCGCGCG GCTGCTGCAT CGCACGACAC GACGCGTCGC GCCGACCGAG GCGGGACGCG AATACTATGA GCGCCTCGTG CAGGCGCTGT CGGAACTCGA CGAAGCCGGA CAGGCGGTCG GCGCCGCGAG CGTCGTGCCG CAGGGCCGCC TGCGCGTGAC GTCGCTGTCC GCGTTCGGAT TGCGGCACGT GATGCAGGCC GTCACCGATT ATGCGGGCCG GTTCCCGGAC GTGATCGTCG ACATGACGCT GTCCGATCGT GTGGTCGACC TGATCGAGGA AGGCTATGAC GTCGCGGTGC GCGCGGCGCC GAACGGACTG AAATCCTCGT CGCTGGTCGC GCGGCAGATC GCGACCGCGC ACATCCTGCT GGTCGCGTCG CCCGAGTATC TCGAGAAGCA CGGCACGCCG CAGACGATCG CCGATCTCGC GCACCACAAC TACCTGCGCC GCGATTCGAA TTCGACGATG CTCGATTCGC TGGTGATCGA CGCGGCCGCC GCGTCGCGCG TGAACCTGAA GGGCAACCTG ATCGTGAACC ATCTCGAAGG GCTGCGCGCG GCCGTGCTCG CGGGCGCGGG CATCGCGCTG CTCGGCACCG AGGTGGTCGG CGACGACATC GAATCCGGCC GGCTCGTGCC GGTGCTGCTC GACTCGGTGC CGCCGCACGA GGCGCCGATC TATGCGGTGT ATGCGAGCCG CCGGCACGTG TCCGCGAAGG TGCGCTCGTT CGTCGACTTC CTCGCCGCGC GTTTCGAAGG GCAGTCGCTG TGCCCGTCGA TCGAATCGCA CCTGCGCGTG CTGCCGATCA CGCGGATCAA GCGCGCGGGC TGA
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Protein sequence | MDTLVSMNVF RYVVEVGSFV GAAERMQMSA AMASKHVMHL EQQLGARLLH RTTRRVAPTE AGREYYERLV QALSELDEAG QAVGAASVVP QGRLRVTSLS AFGLRHVMQA VTDYAGRFPD VIVDMTLSDR VVDLIEEGYD VAVRAAPNGL KSSSLVARQI ATAHILLVAS PEYLEKHGTP QTIADLAHHN YLRRDSNSTM LDSLVIDAAA ASRVNLKGNL IVNHLEGLRA AVLAGAGIAL LGTEVVGDDI ESGRLVPVLL DSVPPHEAPI YAVYASRRHV SAKVRSFVDF LAARFEGQSL CPSIESHLRV LPITRIKRAG
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