| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3013 |
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| Symbol | |
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| ID | 4310600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3331419 |
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| End bp | 3332378 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638150853 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_774903 |
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| Protein GI | 115353064 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTGC CCGCTGTCCT GCAGAACCTG ACGCTGCCCG TCATCGCGTC GCCGATGTTC
ATCGTCAGCT ACCCCGAACT CGTGCTCGCG CAGTGCAAGG CGGGTATCGT CGGATCCTTC
CCCGCGCTCA ACGCCCGTCC GGCCGAACTG CTCGACGAAT GGCTCACGCA GATCCAGTCC
GAGCTCGCCG ACCACAAGGC GAAGCACCCG GACGCGGTGA TCGGCCCGAT CGCGGTCAAC
CAGATCGTCC ACCAGTCGAA TGTGCGCCTC GAGCATGACG TGCGCGTGTG CGTCGAGCAC
AAGGTGCCGA TCTTCATCAC GAGCCTGCGC GCGCCGGCGC GCGAGATCGT CGACGCGGTG
CACAGCTACG GCGGCATCGT GCTGCACGAC GTGATCAACC TGCGTCACGC GCAGAAGGCG
CTCGAAGCCG GCGTCGACGG GCTGATCCTC GTCGCGGCCG GCGCCGGCGG CCACGCGGGC
ACGACGTCGC CGTTCGCGCT CGTCGGCGAA GTGCGCCGGA TGTTCGACGG CCCGATCGTG
CTGTCCGGTT CGATCGCGAA CGGCGGCTCG ATCCTCGCCG CGCAGGCGAT GGGCGCCGAC
TTCGCGTACA TGGGCACGCG CTTCATCGCG ACGCAGGAAG CGCACGCGGT CGAGGACTAC
AAGCACGCGA TCCTCAACGC AAAATCGTCC GACATCATCT ATACGAACCT CTTCACCGGC
GTGCACGGCA ACTACATCCG CGAGAGCATC GAGAAGGCCG GCCTCGATCC GGACGCGCTG
CCGGAATCGG ACAAGACGAA GATGAATTTC GGCGGCGACA AGACGAAGGC GTGGAAGGAC
ATCTGGGGTG CCGGCCAGGG CGTCGGCCTG ATGGACGACC TGCCGAGCGT CGGCGAGCTC
GTCGAGCGGA TGAAGCGCGA GTACGACGAC GCGAAGGCAC GGCTCGGCAT CGCACGCTGA
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| Protein sequence | MALPAVLQNL TLPVIASPMF IVSYPELVLA QCKAGIVGSF PALNARPAEL LDEWLTQIQS
ELADHKAKHP DAVIGPIAVN QIVHQSNVRL EHDVRVCVEH KVPIFITSLR APAREIVDAV
HSYGGIVLHD VINLRHAQKA LEAGVDGLIL VAAGAGGHAG TTSPFALVGE VRRMFDGPIV
LSGSIANGGS ILAAQAMGAD FAYMGTRFIA TQEAHAVEDY KHAILNAKSS DIIYTNLFTG
VHGNYIRESI EKAGLDPDAL PESDKTKMNF GGDKTKAWKD IWGAGQGVGL MDDLPSVGEL
VERMKREYDD AKARLGIAR
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