| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2994 |
|---|
| Symbol | |
|---|
| ID | 4310581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3310764 |
|---|
| End bp | 3311810 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638150834 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_774884 |
|---|
| Protein GI | 115353045 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAC AAGACAATGC CTACGGCGCG GCGTCACTCG CGGCACCCGA CGCCGCGCTG
GCCCGACCGA ACTTCGACGT CGCCGCGTTG CGCAGCCTGG TGGCGGGCGT GGATCTCGGC
AGCTTCGCGA AGGCTGCCGA TCGCGTCGCG CGTTCGTCGT CGGCGGTGAG CGCGCAGATC
CGCAAGCTCG AGGAGCAGGC CGGCACGCCG CTGTTCGTGA AGGCCGGGCG CGGGCTTGCG
CTGACCGACG CCGGCGACGC GATGCTGCGC TATGCGCGGC GGATGATCGA ACTGAACGAC
GAAGCGGCCG CGGCCGTGCG CGGCGTGAAT CTCGACGGCT GGGTGCGGGT CGGCCTGCAG
GAGGATTTCG GCGAGGCGAT CCTGCCCGAC GTGCTCGGGC GTTTCGCGCG TGCGCATCCG
AAGGTGAGGA TCGAGGCGCG CGTCGCGCGC AACGCGGAGC TGCTCGAGCG GCTCGACGCG
AACCAGCTCG ATCTCGCGCT GGTGTGGGGC GATCCGGCGT CGGCGACGCT CGTGTCGCGC
GCGGGCATCG ACAGCGACGC GATCGCGCAG GTGCCGATGC AGTGGATCGC GGCGGTGGGC
GCGGCGGGCT TCGGCATGCC GGACGGTGGC GGCCCGGCGG ATGGGGGCGA CGACGGCGAC
GCGAGTCTGC GTGCGATGCG CGCGTCGGCC GAGCCGCTGC CGCTCGTCGT GTTCGACCGG
CCGTGCCGGT TCTTCGGCGC GGCGACCGAC GCGCTCGACC GCGCGGGCGT GCCGTGGCGC
GTCGCGTTCA CGACGCCGAG CCTGGCCGGG CTGTGGGCCG CGGCGTCAGC CGGCCTCGGG
CTGACGGTGC GCTCGCATTA TGGGTTGCCC GCGTCGGTGC GCGTGCTCGA CGCGGCGTCG
TTCGGGCTGC CGGAACTGCC GAGCCTGCCG CTGATGCTGC TGCGGCGCAC GTCGTCGGCG
ACGCCGACCG TCGAGCGGCT CGCGCGGATC GTCACGCAGG CGGTGCGGGA CGCGACGCAG
GCAGAAGTGG CGATGCTTGC GGCGTAA
|
|---|
| Protein sequence | MSGQDNAYGA ASLAAPDAAL ARPNFDVAAL RSLVAGVDLG SFAKAADRVA RSSSAVSAQI
RKLEEQAGTP LFVKAGRGLA LTDAGDAMLR YARRMIELND EAAAAVRGVN LDGWVRVGLQ
EDFGEAILPD VLGRFARAHP KVRIEARVAR NAELLERLDA NQLDLALVWG DPASATLVSR
AGIDSDAIAQ VPMQWIAAVG AAGFGMPDGG GPADGGDDGD ASLRAMRASA EPLPLVVFDR
PCRFFGAATD ALDRAGVPWR VAFTTPSLAG LWAAASAGLG LTVRSHYGLP ASVRVLDAAS
FGLPELPSLP LMLLRRTSSA TPTVERLARI VTQAVRDATQ AEVAMLAA
|
|---|
| |