| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2988 |
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| Symbol | |
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| ID | 4310575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3299337 |
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| End bp | 3302909 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638150828 |
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| Product | 2-oxoacid ferredoxin oxidoreductase |
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| Protein accession | YP_774878 |
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| Protein GI | 115353039 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC GCCTGCCTGT CGACGGTACG CCCGCTCTAT CCGACTATCG TCTGACCGAC
AACCTGACCG CCACGCGCGG CCGGATCTTC CTCACCGGCA CGCAGGCGCT GGTGCGCCTG
TTGCTGATGC AGCGCGCATC CGACGTCGCG CAGGGACTCA ACACGGCCGG CTTCGTCAGC
GGCTACCGCG GTTCGCCGCT CGGGATGGTC GACCAGCAGC TGTGGAAGGC GCAGAAGCTG
CTCGACGGCA GCGGCGTGCG CTTCCTGCCC GCGATCAACG AGGAACTCGG CGGCACCGCG
GTGCTCGGCA CGCAGCGCGT CGAGGCTGAC CCGGAGCGCA CCGTCGATGG CGTGTACGCG
ATGTGGTACG GCAAGGGCCC CGGCGTCGAT CGCGCCGGCG ACGCGCTGAA GCACGGCAAC
GCATACGGTT CGTCGCCGCA CGGCGGCGTG CTGGTGGTGG CGGGCGACGA CCATGGCTGC
GTGTCGTCGT CGATGCCGCA CCAGAGCGAC TTCGCGATGA TCGCGTGGCA CATGCCGGTC
GTGAACCCGT CGAACATCGC CGACATGCTC GAGTTCGGCC TGTACGGCTG GGCGCTGTCG
CGCTATTCGG GCGCATGGGT CGGCTTCAAG GCGATCTCGG AGACGGTCGA GTCCGGCTCG
ACCGTCGACC TCGACGCGCT GCAGACGCAA TGGCCGGCGC CGGCGGGCTT CACGCCGCCG
GCGGGCGGCC TGCACAACCG CTGGCCCGAC CTGCCGAGCC TTACGATCGA GGCGCGCCTC
GCCGCGAAGC TCGACGCGGT GCGCCACTTC GCGCGCACCA ACAGCATCGA CAAGTGGATC
GCGCCGAGCG CGCAGGCGAA CGTCGGCATC GTCACCTGCG GCAAGGCGCA CCTCGACCTG
ATGGAAGCGC TGCGCCGTCT CGACCTGACG GTGGCCGACC TCGACGCGGC CGGCGTGCGG
ATCTACAAGG TCGGCCTGTC GTATCCGCTC GAGATGACGC GCATCGAGAC CTTCGTCGAC
GGGCTCGCCG AAGTGCTGGT GATCGAGGAG AAGGGCCCTG TCGTCGAGCA GCAGATCAAG
GACTACCTGT ACAACCGCGC GGACGGCGCC CGCCCGCGCG TGCTCGGCAA GCACGATGCG
CAGGGTGCCT GCCTGTTGTC CGAACTCGGC GAGCTGCGGC CGTCGCGGAT CCTGCCGGTG
TTCGCCGAAT GGCTCGCGCG CCACAAGCCG GCGCTCGATC GCCGCGAACG CGTCGTCGAT
CTCGTCGCGC CGCGGATCCT GTCGAACGAG GCGGACGCGG TGAAGCGCAC GCCGTACTTC
TGCTCGGGCT GCCCGCACAA CACGTCGACG AAGGTGCCGG AAGGCTCGAT CGCGCAGGCC
GGCATCGGCT GCCACTTCAT GGCGTCGTGG ATGGAGCGCG ACACGACGGG CCTGATCCAG
ATGGGCGGCG AGGGCGTCGA CTGGGCTGCG CACGCGATGT TCACCAACAC GAAGCACGTG
TTCCAGAACC TCGGCGACGG CACCTACTTC CACTCTGGCA TCCTCGCGAT CCGCCAGGCG
GTCGCCGCGA AGGCGAACAT CACGTACAAG ATCCTCTACA ACGACGCGGT CGCGATGACG
GGCGGCCAGC CGGTCGACGG CAGCATCTCG GTGCCGCAGA TCGCGCGGCA GGTCGAGGCG
GAAGGCGTGT CGCGCTTCGT GGTGGTGTCC GACGAACCGG AGAAGTACGA CGGCCATCAC
GGGCAGTTCC CGGCCGGCAC GACGTTCCAT CACCGCAGCG AGCTCGACAC CGTGCAGCGC
GAGCTGCGCG AGACGCCGGG CGTCACCGTG CTGATCTACG ACCAGACCTG CGCGGCCGAG
AAGCGTCGCC GCCGCAAGAA GGGCGAGTTC CCCGACCCGG ACAAGCGCCT GTTCATCAAC
GACGCGGTGT GCGAAGGCTG CGGCGACTGC GGCGTGCAGT CGAACTGCCT GTCGGTCGAG
CCGCTCGAGA CGCCGCTCGG CCGCAAGCGT CGCATCGACC AGTCGTCGTG CAACAAGGAC
TACTCGTGCG TGAACGGCTT CTGCCCGAGC TTCGTGACGG TCGAAGGCGC GGCACTGAAG
AAGGCCGCGG GCGCGGCGTT CGACGAGGCG GCGCTCGCCG CGCGCGTCGA TGCGCTGCCG
GTGCCCGCGA CGCATCTCGA CGCGGCGCCG TTCGACATGC TCGTGACGGG CGTCGGCGGC
ACGGGCGTCG TGACGGTCGG CGCGCTGATC AGCATGGCCG CGCATCTCGA AGGCAAGAGC
GCATCGGTGC TCGACTTCAT GGGCTTTGCG CAGAAGGGCG GCTCGGTGCT GTCGTTCGTG
CGGATCGCGT CGAGCGACAA ATGGCTGAAC CAGGTGCGCA TCGACACGCA GCAGGCCGAC
GTGCTGCTCG CGTGCGACAT GGTCGTCGGC GCGAGTGCCG AGGCGCTGCA GACGGTGCGC
CACGAGCGTT CGCGGATCGT CGTCAACACG CACCGGATTC CGAACGCATC GTTCGTGCAG
AATCCCGACG CAAACCTGCA CGCGGATGCG CTGCTCGAGA AGATGCATCA CGCGGCCGGC
GACGGCTACC TGTCGAGCTG CGACGCGCAG GCGCTTGCCG CGAAATTCCT CGGCGACTCG
ATCGGCGCGA ACATCCTGAT GCTCGGCTAC GCGTGGCAGC TCGGCCTCGT GCCGGTGTCG
CTCGCCGCGA TGATGCGCGC GATCGAACTG AACAACGTCG CGGTGCCGAT GAACAAGCTC
GCGTTCTCGA TCGGCCGGAT GGCGGCCGGC GACGCGGCGG GCCTCGATGC ATTGTGGAAC
GCGCGTCACA CGGTGGCCGC GCAGGCCGCG CCGGAGACGC TCGCCGAACT GATCGCCGAT
CGCGAAGCGC GCCTCGACGC ATACGGCGGC GCGCGTTACG TCGAGCGCTA CCGTGCGCTG
GTGAACGCGG CGCGCGCGAA GGGCGACGAC GCGCTGACGC GTGCGGTTGC GACGACGTTC
TACCGGCTGC TCGCGGTGAA GGACGAGTAC GAGGTCGCGC GGCTGTATGC GGACGGCGCG
TTCCGCACGG CGCTCGAAGC GCAGTTCGAA GGCGTGCCGG GGCAGGCCTA TCGCGTGAAG
TTCAACCTGG CGCCGCCGAC GGTCGCGAAG GCCGGACGCG ACGGCAGCGC GCCGAAGAAG
CGCGTGTTCG GCCAGTGGAT GTGGCCGGTA TTCGGCATGC TGGCGCGCGT GCGCAGCCTG
CGCGGCACGT GGCTCGATCC GTTCGGCCGC ACGGCCGAGC GCAGGATGGA GCGCGCGCTC
GCGGACGACT ACGAGACGAC GCTCACGCGC GCGCTCGCCG CGCTGACGGC CGGCAATGCC
GCGCAGGTCG CGCAGCTGGC CGACCTGCAT GCCCGCGTGC GCGGCTTCGG TCACGTGAAG
GTGCGCAATC TGGCCGGCGT GAAGCGTACG GAGCGTGAGC TCGCGCTGCA GCTCGGCATC
GACGCGGCGA CGAGCGCGGC CGTGCAGCAC GCGCTCGACG AGATGAAGGG CGCGGGGATG
CTGAAGGGCA TTCCGGTCGT CGTCGCGAAG TAA
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| Protein sequence | MTARLPVDGT PALSDYRLTD NLTATRGRIF LTGTQALVRL LLMQRASDVA QGLNTAGFVS
GYRGSPLGMV DQQLWKAQKL LDGSGVRFLP AINEELGGTA VLGTQRVEAD PERTVDGVYA
MWYGKGPGVD RAGDALKHGN AYGSSPHGGV LVVAGDDHGC VSSSMPHQSD FAMIAWHMPV
VNPSNIADML EFGLYGWALS RYSGAWVGFK AISETVESGS TVDLDALQTQ WPAPAGFTPP
AGGLHNRWPD LPSLTIEARL AAKLDAVRHF ARTNSIDKWI APSAQANVGI VTCGKAHLDL
MEALRRLDLT VADLDAAGVR IYKVGLSYPL EMTRIETFVD GLAEVLVIEE KGPVVEQQIK
DYLYNRADGA RPRVLGKHDA QGACLLSELG ELRPSRILPV FAEWLARHKP ALDRRERVVD
LVAPRILSNE ADAVKRTPYF CSGCPHNTST KVPEGSIAQA GIGCHFMASW MERDTTGLIQ
MGGEGVDWAA HAMFTNTKHV FQNLGDGTYF HSGILAIRQA VAAKANITYK ILYNDAVAMT
GGQPVDGSIS VPQIARQVEA EGVSRFVVVS DEPEKYDGHH GQFPAGTTFH HRSELDTVQR
ELRETPGVTV LIYDQTCAAE KRRRRKKGEF PDPDKRLFIN DAVCEGCGDC GVQSNCLSVE
PLETPLGRKR RIDQSSCNKD YSCVNGFCPS FVTVEGAALK KAAGAAFDEA ALAARVDALP
VPATHLDAAP FDMLVTGVGG TGVVTVGALI SMAAHLEGKS ASVLDFMGFA QKGGSVLSFV
RIASSDKWLN QVRIDTQQAD VLLACDMVVG ASAEALQTVR HERSRIVVNT HRIPNASFVQ
NPDANLHADA LLEKMHHAAG DGYLSSCDAQ ALAAKFLGDS IGANILMLGY AWQLGLVPVS
LAAMMRAIEL NNVAVPMNKL AFSIGRMAAG DAAGLDALWN ARHTVAAQAA PETLAELIAD
REARLDAYGG ARYVERYRAL VNAARAKGDD ALTRAVATTF YRLLAVKDEY EVARLYADGA
FRTALEAQFE GVPGQAYRVK FNLAPPTVAK AGRDGSAPKK RVFGQWMWPV FGMLARVRSL
RGTWLDPFGR TAERRMERAL ADDYETTLTR ALAALTAGNA AQVAQLADLH ARVRGFGHVK
VRNLAGVKRT ERELALQLGI DAATSAAVQH ALDEMKGAGM LKGIPVVVAK
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