| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2982 |
|---|
| Symbol | bioD |
|---|
| ID | 4310569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3291483 |
|---|
| End bp | 3292202 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638150822 |
|---|
| Product | dithiobiotin synthetase |
|---|
| Protein accession | YP_774872 |
|---|
| Protein GI | 115353033 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0132] Dethiobiotin synthetase |
|---|
| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CGCTCTCGCT GTTCGTCACC GGCACCGACA CCGAAATCGG CAAGACCTTC
GTCTCGGCTG CGATGCTGCA CGGCTTCGCG CGGCATGGCC TGCGTGCAGC CGCGCTGAAG
CCCGTCGCGG CGGGCGCGTA TGAACGCGAC GGTGTCTGGC GCAACGAGGA CGCCGACCAG
CTCGACGCGG CCGCCAACGT CGTGCTGCCG CCCGAGCTGC GCACGCCGTT CCTGCTGAAG
GCGCCCGCCG CGCCGCACAT CGTCGCCGCG CAGGAAGGCG TGACGCTCGA CATCGACACG
ATCGTCGCGT GCCATCGCGA AGCGCTGACG CGCGCGGACG TCGTCGTCGT CGAGGGCGTC
GGCGGCTTCC GCGTGCCGCT CACCGACACG CAGGACACGG CCGATCTCGC GGTCGCGCTC
GGCCTACCGG TGGTGCTCGT CGTCGGCGTG CGGCTCGGCT GCATCAGCCA TGCGCTGCTC
ACCGCCGACG CGATTCGCCA GCGCGGCCTC ACGCTCGCCG GCTGGGTCGC GAACCACGTC
GACCCGGCGA TGTCGTACGC CGACGAGAAC GTCGCGACGA TTCGCGACTG GCTCGCCCGC
GAGCACGGCG CGCCGCTGCT CGGCCGCATT CCGCACATGA GCCCGGCCGC CGCCGAATCC
GCCGCGGCGA TGCTCGACAT CGCCGCGCTC GTCGAGACGC TGCGCGCCGC GCAGCATTGA
|
|---|
| Protein sequence | MTAPLSLFVT GTDTEIGKTF VSAAMLHGFA RHGLRAAALK PVAAGAYERD GVWRNEDADQ
LDAAANVVLP PELRTPFLLK APAAPHIVAA QEGVTLDIDT IVACHREALT RADVVVVEGV
GGFRVPLTDT QDTADLAVAL GLPVVLVVGV RLGCISHALL TADAIRQRGL TLAGWVANHV
DPAMSYADEN VATIRDWLAR EHGAPLLGRI PHMSPAAAES AAAMLDIAAL VETLRAAQH
|
|---|
| |