Gene Bamb_2977 details

Gene Information

• Locus tag: Bamb_2977
• ID: 4310564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 3285391
• End bp: 3286068
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638150817
• Product: short chain dehydrogenase
• Protein accession: YP_774867
• Protein GI: 115353028
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCG TACTGATCGT CGGCGCATCG CGCGGCTTGG GGCGCGAATT CGTCCGGCAA 
TACCGCCGCG ACGGCTGGAA CGTGATCGCG ACCGCCCGCG ACGACGCATC GCTCGCCGCG 
CTGCGCGAAC TCGGCGCGCA AGCGTATGCG CTCGACATCG CGCAACCCGA ACAGATCGCG 
GCGCTCGGCT GGAAGCTCGA CGGCGAACGG CTCGACGCGG CCGTGCTCGT GTCGGGCGTG 
TACGGGCCGC GCACCGAAGG CGTCGAGACG ATCGGCGCCG AGGATTTCGA CGCGGTGATG 
CATACGAACG TGCGCGGGCC GATGCAGCTG CTGCCGATCC TGCTGCCGCT CGTCGAGGAC 
GCGCGCGGCG TGCTGGCCGT CGTCTCGAGC CGGATGGGCA GCATCGCGGA AGCGACCGGC 
ACGACCGGCT GGCTGTACCG TGCGAGCAAG GCCGCGCTGA ACGACGTGCT GCGCATCGCG 
TCGCTGCAGA CGCGCCACGC CGCGTGCATC TCGCTCCATC CCGGCTGGGT GCGCACCGAC 
ATGGGCGGCG CGCAGGCCGC GATCGATCCG GAAACCAGCG TGACCGGCAT GCGCCGCGTG 
ATCGCCGAAG CCGGCGCGGA CGTGTCCCGC GCCAACGGCC GTTTCTTCCA GTACGACGGC 
GTCGAGCTCA GTTGGTGA 

 

Protein sequence

MKTVLIVGAS RGLGREFVRQ YRRDGWNVIA TARDDASLAA LRELGAQAYA LDIAQPEQIA 
ALGWKLDGER LDAAVLVSGV YGPRTEGVET IGAEDFDAVM HTNVRGPMQL LPILLPLVED 
ARGVLAVVSS RMGSIAEATG TTGWLYRASK AALNDVLRIA SLQTRHAACI SLHPGWVRTD 
MGGAQAAIDP ETSVTGMRRV IAEAGADVSR ANGRFFQYDG VELSW