| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2965 |
|---|
| Symbol | |
|---|
| ID | 4310552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3268390 |
|---|
| End bp | 3269457 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638150805 |
|---|
| Product | methionine synthase |
|---|
| Protein accession | YP_774855 |
|---|
| Protein GI | 115353016 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCGA CCCCTCTCGC TGCTTCCGTC CCGCTCGACG CGCGCTACAC GCGCGGCGCC
GAACTGCCCG CGCTGCTGAA ATCGCGCATC CTGATCCTCG ACGGCGCGAT GGGCACGATG
ATCCAGCGCT ACAAACTCGA CGAGGCCGCC TATCGCGGCG AGCGCTTCAA GGATTTCCCG
CGCGACATCA AGGGCAACAA CGAGCTGCTG TCGCTCACGC AGCCGCAGAT CATCCGCGAG
ATCCACGACC AGTACTTCGC GGCCGGCGCG GACATCGTCG AAACCAACAC GTTCGGCGCG
ACGACGGTCG CGCAGGCCGA CTACGGGATG GAAGACCTCG TCGTCGAGAT GAACGTCGAA
TCGGCGCGGC TCGCGCGCGA ATCGGCCGTG CGCTACGCGA CGCCGGACAA ACCGCGCTTC
GTCGCGGGCG CGATCGGGCC GACGCCGAAG ACGGCGAGCA TCTCGCCGGA CGTCAACGAC
CCGGGCGCGC GCAACGTCAC GTTTGACGAA CTGCGCAGCG CGTATTACCA GCAGGCGAAG
GCGCTACTCG ACGGCGGCGT CGACCTGTTC CTCGTCGAGA CGATCTTCGA CACGCTGAAC
GCGAAGGCCG CGCTGTTCGC GCTCGACGAA TTGTTCGAGG ACACCGGCGA GCGCCTGCCG
ATCATGATCT CGGGCACCGT GACCGACGCG TCGGGCCGCA TCCTGTCGGG CCAGACGGTC
GAGGCGTTCT GGAATTCGCT GCGCCACGCG AAGCCGCTCA CGTTCGGCCT GAACTGCGCG
CTCGGCGCGG CGCTGATGCG CCCGTACATC GCCGAACTCG CGAAGCTGTG CGACACCTAC
GTGTCGTGCT ACCCGAACGC GGGCCTGCCG AACCCGATGA GCGACACCGG TTTCGACGAG
ACGCCGGACG TCACGTCGGG CCTGCTGAAG GAATTCGCGC AAGCCGGGCT CGTCAACCTC
GCGGGCGGCT GCTGCGGCAC GACGCCCGAG CACATCGCCG AGATCGCGAA GGCGCTCGCC
GACGTGAAAC CGCGCCGCTG GCCGAGCCAC TACAGCGACG CCGCCTGA
|
|---|
| Protein sequence | MSATPLAASV PLDARYTRGA ELPALLKSRI LILDGAMGTM IQRYKLDEAA YRGERFKDFP
RDIKGNNELL SLTQPQIIRE IHDQYFAAGA DIVETNTFGA TTVAQADYGM EDLVVEMNVE
SARLARESAV RYATPDKPRF VAGAIGPTPK TASISPDVND PGARNVTFDE LRSAYYQQAK
ALLDGGVDLF LVETIFDTLN AKAALFALDE LFEDTGERLP IMISGTVTDA SGRILSGQTV
EAFWNSLRHA KPLTFGLNCA LGAALMRPYI AELAKLCDTY VSCYPNAGLP NPMSDTGFDE
TPDVTSGLLK EFAQAGLVNL AGGCCGTTPE HIAEIAKALA DVKPRRWPSH YSDAA
|
|---|
| |