Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2943 |
Symbol | |
ID | 4310687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3245685 |
End bp | 3246995 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638150783 |
Product | Serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_774833 |
Protein GI | 115352994 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTGT CTCCCCAAGG CCTCAAGTCC CTCGCTTCTT CCATCGCCTT CGGCACCGCC GCGCGCAACG TCGCGCTGGG CGTGATGCTG CCCGTCGCGC TCGCATCGAC GATCGTCGTC GCCGAGGCGA AGCCGGCCGC CAAGGCCAAG GCCGCGCACG CGGCGCCGGC CGCCGAGCAG TTCACCGGCG CGCCCGCGAC CTTCATGCCG GGCGCGGTGC CGCCGCCGGG CGTGAACGCG CGCTCGTGGG TGCTCGTCGA TGCGACGAGC AACACGGTGC TCGCATCGGG CAACGCCGAC GAACGCGTCG AGCCCGCATC GCTCACGAAG CTGATGACGG CCTACCTGGT GTTCGAGGCG CTCGACAAGA AGAAGATCTC GATGGAGCAG ATCATCACGC CGAGCGAGGC AGTGCGCCGC GTCGGCCTCG ACGAGTCGCG CATGTTCATC GAGGCGAACA AGCCGGTGTC GGTGCACGAC CTCGTGTACG GGATGATCAT CCAGTCGGGC AACGACGCCG CGATCGCGCT GGCCGAACTG GTCGGCGGCA GCGAAGGGCA GTTCGTCACG CTGATGAACG CCGAGGCGCA GCGCCTCGGC ATGAAGGGCA CGCACTTCGC CGACGTGAAC GGCATGCCCG ATCCGAACCA CTACACGACG GCCGGCGACC TCGCGAAGCT GTCCGCGCAC CTGATCCGCG ATTTTCCGCA GTACTACGGC ATCTTCTCGG AGAAGGAATT CAAGTACAAC AACATCCGCC AGGGCAACCG CAACCGGCTG CTGTGGCTGG ATCCGACGGT CGACGGCCTG AAGACGGGCC ACACGCAAGC GGCCGGCTAC TGCCTGATCG CATCGGCCAA GCGCGCGATC CCGGGTGTCG ACGGCCAGCG CCGTCTCGTG TCGGTGATGA TGGGCGAGCC GAAGGAAGGC GAGCGCACGC AGGACAGCAT GAAGATGCTG AACTACGGCT ATAGCGCGTT CGACGCGGTG CGCCTGTTCA AGGGTGGCCA GGCGATGTCG ACGCCGCGCG TCTACAAGGG CAAGGAGAGC ACCGTGCAGG TCGGCGTGAA GAGCGACCAG TGGGTGACCG TGCCGCGCGG CCTGGGCGAC AAGGTGAAGC CGGAAGTCGA CGTCAACGCG CCGCTGATCG CGCCGCTCGC GGAAGGCCAG CAGGTCGGTA CCGTGAAGCT CGTCGCCGAC GGCAAGACGC TGTCGGAGTT CCCGGTCGTC GCGCTGCAGC CGGTGCCGGA AGCGGGTATC TTCGGGCGTA TCTGGGACTC GATCCTGCTG ATGTTCAGCA AGAAGAAGTA G
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Protein sequence | MRLSPQGLKS LASSIAFGTA ARNVALGVML PVALASTIVV AEAKPAAKAK AAHAAPAAEQ FTGAPATFMP GAVPPPGVNA RSWVLVDATS NTVLASGNAD ERVEPASLTK LMTAYLVFEA LDKKKISMEQ IITPSEAVRR VGLDESRMFI EANKPVSVHD LVYGMIIQSG NDAAIALAEL VGGSEGQFVT LMNAEAQRLG MKGTHFADVN GMPDPNHYTT AGDLAKLSAH LIRDFPQYYG IFSEKEFKYN NIRQGNRNRL LWLDPTVDGL KTGHTQAAGY CLIASAKRAI PGVDGQRRLV SVMMGEPKEG ERTQDSMKML NYGYSAFDAV RLFKGGQAMS TPRVYKGKES TVQVGVKSDQ WVTVPRGLGD KVKPEVDVNA PLIAPLAEGQ QVGTVKLVAD GKTLSEFPVV ALQPVPEAGI FGRIWDSILL MFSKKK
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