Gene Bamb_2906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2906 
Symbol 
ID4310755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3205985 
End bp3206497 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content70% 
IMG OID638150746 
ProductRNA methyltransferase 
Protein accessionYP_774796 
Protein GI115352957 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACGTTG CGCCGCCCCG GCCGGCCCAG CCAGACCCAA CCATGTTCAA CGTCATCCTC 
GTCGCGCCCG AAATTCCGCC GAACACCGGC AACGTGATCC GCCTGTGCGC CAACACCGGC
GCGCGCCTGC ACCTGATCGA GCCGCTCGGC TTTCCGCTCG ACGACGCGAA GATGCGCCGC
GCCGGCCTCG ACTATCACGA GTACGCGGAA ATGCGCGTGC ACCGCGACTG GGACGCGTTC
GTCGCGGCCG AAGCGCCCGA TCCCGCGCGC ATGTTCGCGT TCACGACCCG CGGTTCGGGC
CGCTTCCACG ACCACGCGTT CGTGCCGGGC GACTGGTTCG TGTTCGGCTC GGAAACGCGC
GGCCTGCCGG CCGACGTGCT CGAGCGCTTC CCGAACGAAC AGCGCGTGCG CCTGCCGATG
CGCCCGGGCA ATCGCAGCCT GAACCTGTCG AACACGGTCG CGGTGGTCGT GTTCGAGGCG
TGGCGCCAGG CCGGCTTCGA AGGCGGCGCG TGA
 
Protein sequence
MHVAPPRPAQ PDPTMFNVIL VAPEIPPNTG NVIRLCANTG ARLHLIEPLG FPLDDAKMRR 
AGLDYHEYAE MRVHRDWDAF VAAEAPDPAR MFAFTTRGSG RFHDHAFVPG DWFVFGSETR
GLPADVLERF PNEQRVRLPM RPGNRSLNLS NTVAVVVFEA WRQAGFEGGA