| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2893 |
|---|
| Symbol | |
|---|
| ID | 4310742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3193392 |
|---|
| End bp | 3194009 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638150733 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_774783 |
|---|
| Protein GI | 115352944 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.945666 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCATT CACGGTTCGG GCGCCGCGCG CGCCAAGGCT GGATGCTCAC CTGCGCATTC
GCGGCAGCCA CGCTGCTCGC GGGCTGCGAC AACGCGCCGA AATTCCAGAA TCTCGACATC
ACCGGCAACA CGCAGTTCGG CAGCGATTTC TCGCTGCCCG ACACGACCGG CAAGGTGCGC
ACGCTCGCCG ACTTCAAGGG CCGTGCCGTC GTGATGTTCT TCGGTTATAC GCACTGTCCG
GACGTGTGTC CGACCACGAT GGCCGAACTG TCCGAGGCGC TGAAGCAGCT CGGGCCCGAC
GCGGCGAAGC GCGTGCAGGT GTTGTTCGTC ACCGTCGATC CGGAGCGCGA CACGCCCGCG
CTGCTCGGCC AGTACGTGCC CGCGTTCGAT CCGTCGTTCA TTGGCCTGCG GCCGGCCGAC
GAAGCGCAGC TCAAGAAGGT CACGAAGGAT TTCCGCGTGT ACTACGCGAA GGTGGCCGGC
AAGACGCCCG GCAGCTACAC GATGGATCAC ACCGCCGCGA GCTACGTGTT CGATCGCGAC
GGCAAGCTGC GCCTGTTCGT GCGCGACGGC CAGGGCCCGG GCCCGTGGGT CCACGACCTG
AAACTGCTGG TCGACTGA
|
|---|
| Protein sequence | MLHSRFGRRA RQGWMLTCAF AAATLLAGCD NAPKFQNLDI TGNTQFGSDF SLPDTTGKVR
TLADFKGRAV VMFFGYTHCP DVCPTTMAEL SEALKQLGPD AAKRVQVLFV TVDPERDTPA
LLGQYVPAFD PSFIGLRPAD EAQLKKVTKD FRVYYAKVAG KTPGSYTMDH TAASYVFDRD
GKLRLFVRDG QGPGPWVHDL KLLVD
|
|---|
| |