Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2890 |
Symbol | |
ID | 4310739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3190180 |
End bp | 3190995 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638150730 |
Product | YaeC family lipoprotein |
Protein accession | YP_774780 |
Protein GI | 115352941 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.065227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTC GCAGTCTCCT GAAGGTATTT TCCGTGCTGG CCACCGGTGC CGCGCTGACG CTGTCGGCGG GTGCGCACGC CGAAGACAAG GTGATCAAGG TCGGCACGGT CGCCGGTCCG GATTCGGAAG TGTGGCAGGT CGTGCAGAAG GTCGCGAAGG AGAAGCAAGG CCTGAACGTG AAGGTCGTCG AGTTCAACGA CTACGTGCAG CCGAACGCGG CGCTCGATTC GGGCGACCTC GACGCGAACA GCTTCCAGCA CCAGCCCTAC CTCGACAGCC AGGTGAAGCA GCGCGGCTAC AAGCTCGTCA CCGCGGGCCT GACCTACATC TCGCCGATCG GCGTGTACTC GAAGAAGTTC AAGTCGCTGA AGGACCTGCC GCAAGGCGCG AAGCTCGCGG TGCCGAACGA TCCGTCGAAC GAGAACCGCG CGCTGCTGCT GCTGCAGACG CAAGGCGTGA TCAAGCTGAA GGCGGGCGCC GGCACGGGCG GCAACAACGC GACGGTGCTC GACATCGCCG AGAACCCGAA GAAGCTGAAG ATCTCCGAGC TCGACGCCGC GCAACTGCCG CGGGTGCTGT CGGACGTCGA CGCGGCCGTG ATCAACACGA ACTACGCGCT CGCCGCCAAC CTGCAGCCGA CCAAGGACGC GATCGCGCTC GAATCGCTGA CGAGCCCGTA CGCGAACGTG ATCGCCGTGC GCGCGAAGGA CAAGGACCAG CCGTGGGTGA AGAAGCTGGT CAAGGCGTAC CAGTCGCCGG AAGTGCGGGA ATTCATCAAG AAGCAGTTCA AGGGCTCGAT GGTCGCGTCG TTCTGA
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Protein sequence | MKRRSLLKVF SVLATGAALT LSAGAHAEDK VIKVGTVAGP DSEVWQVVQK VAKEKQGLNV KVVEFNDYVQ PNAALDSGDL DANSFQHQPY LDSQVKQRGY KLVTAGLTYI SPIGVYSKKF KSLKDLPQGA KLAVPNDPSN ENRALLLLQT QGVIKLKAGA GTGGNNATVL DIAENPKKLK ISELDAAQLP RVLSDVDAAV INTNYALAAN LQPTKDAIAL ESLTSPYANV IAVRAKDKDQ PWVKKLVKAY QSPEVREFIK KQFKGSMVAS F
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