Gene Bamb_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2888 
Symbol 
ID4310737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand- 
Start bp3188842 
End bp3189549 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content75% 
IMG OID638150728 
Producthypothetical protein 
Protein accessionYP_774778 
Protein GI115352939 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0908766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCAT CCTCCATTTC TCCCGAATCC CTGCATCCGT CGCTCTGGCG CGGCTCGCAG 
CTGGCGCGCG GCGGTCCGCG CACGATCGAC ACGGGCTTCG CGCCGCTGTC CGCCGAACTG 
CCGGGCGGCG GCTGGCCGGT CGGCGGCCTC GTCGAACTGC TGGCCGCGCA GCCGGGCTGC 
GGCGAGATGC GGCTGCTCGC GCCGGCGCTC GCGCGTACCG TCAGCGCACG GCGTCCGCTC 
GCGCTCGTCG CGCCGCCGCA CTCGCCGCAT GCGAGCGCGC TGGCCGGTCT CGGCGTGCCG 
TCCGACGCGC TGCTGTGGCT GCGCGCCGGC AGCCGCACCG ATGCGTTGTG GGCCGCCGAG 
CAGGCGCTCA AGACGGGCTG CTGCGGTGCG CTGCTGCTGT GGCAGGACGC ACGGCCCGAC 
GCGCTGCGGC GTCTACATCT CGCGGCCGCG CGCACCGGCG ACACGCTGTT CGTGATGCTG 
CGCCCGCTGG CGGGCGCGCG GCAGCCGTCG CCGGCCGTGC TGCGCGTCGC GCTGCATCCG 
ATGCCGGGCG GTGTGTCGCT CGACATCGTC AAGCGTCGGG GGCCCGCGCG CAGCGAGCCG 
CTCACGCTCG ATTTGCCATC GCCCATCGTG GAGAGCCGCT ATGCGCGTCT TGCTCGGCAT 
CCATCTGCCG CGCCTGCCGC TCGACGTGTG CGCCCCGCCG CCGTCTGA
 
Protein sequence
MLASSISPES LHPSLWRGSQ LARGGPRTID TGFAPLSAEL PGGGWPVGGL VELLAAQPGC 
GEMRLLAPAL ARTVSARRPL ALVAPPHSPH ASALAGLGVP SDALLWLRAG SRTDALWAAE 
QALKTGCCGA LLLWQDARPD ALRRLHLAAA RTGDTLFVML RPLAGARQPS PAVLRVALHP 
MPGGVSLDIV KRRGPARSEP LTLDLPSPIV ESRYARLARH PSAAPAARRV RPAAV