| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2886 |
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| Symbol | dnaE2 |
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| ID | 4310735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3184200 |
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| End bp | 3187415 |
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| Gene Length | 3216 bp |
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| Protein Length | 1071 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638150726 |
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| Product | error-prone DNA polymerase |
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| Protein accession | YP_774776 |
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| Protein GI | 115352937 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.811803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCCG AATTCAGTTG GCTGCCCGAT TACGCGGAAT TGTTCTGTCG TTCGAACTTC
TCGTTCCTGC ATGGCGCGTC GCATGCGGAG GAACTGGTCG AGCGCGCCGC CGAGCTCGGC
TATCGCGGGA TCGCGATCAC TGACGAATGC TCGCTCGCCG GCGCACCGCG CATGCATGTC
GCGGCGAAGG CGCAAGGGCT GCCGCTGATC GTCGGTTCGT TCTTCGAAGT AACGCCCGAT
GAAGTCACCC CCGGCCACGA TCCGGGCCCC GGCGCGTTCG GGCTCGTGCT GCTCGCGCAG
AACCGCGAGG GCTACGGCAA CCTGTCCGAG CTGATCTCGT GGCGGCGCAT GGCGTCGCCG
AAGGGCACAT ACCGGCTGAC GTCGAGGATG CTGTCGGCGC CGCCCGCGGA GTTCGCCCAC
TTGCGCGGCA TGCCCGACTG CTTCGCGATT CTCGTCCCCA CGTATCCGGT GCGTGCGGAC
GTACTCGATG CGCAGGTCGC CTGGTTTCGC GCGACGTTCG GCGCGCGGGC GCGACTCGGG
CTCGTGCAGC TGCAGCGCCC GCTCGACGGC GCGCAGCGCG AGGAGATTCG CGCGGCCGGC
GAGCGGCGCG GCGTGCGTAT CGTCGCGCTC GGCGACGTGA CGATGCATCG GCGCTCCTGC
AAGCCGCTGC AGGACGTGAT GACGGCGATC CGCGTCGGGA TGCCGGTTTC CGAGTGCGGG
TATGCGCTCG CGCCGAATGC GGAACAGCAT CTGCGCGCGC GTGGGCGCAT CGCGAAGCTG
TTTTCGCCGG AGGAGCTCGA CGAGACCTGC GCGATTCTCG ATGCGTGCGA CTTCAAGCTC
GACTCGCTTC AGTACGAGTA TCCCGACGAG ATCGTGCCGA AAGGGCTCAC GCCGACGCGC
CATCTGGAAC AGGAGACCTT CGCGGGGGCC GCCGCGCGTT ATCCGCAGGG CATTCCGGAG
AAAGTCGAGA GGCAGATCCG CTATGAACTC GACCTGATCG CGCGGCTGAG CTACGAACCG
TTCTTCCTGA CCGTCTACGA CATCGTCAAA TACGCGCGCA GCCAGAACAT CCTGTGCCAG
GGCCGCGGCT CGGCGGCGAA CTCGGTCGTG TGTTATTGCC TCGGCATCAC CGAGGTGAAT
CCCGAGCAGA GCACGATGCT GTTCGAGCGC TTCATCAGCG AGGAGCGCGG CGAGCCGCCC
GACATCGACG TCGACTTCGA GCATCAGCGC CGGGAAGAGG TGATCCAGCA TATCTACAAA
AAATACGGAC ACGATCGCGC CGCGCTCGCG GCGGCCGTCT CGACGTATCG CCCGCGCGGC
GTGCTGCGCG AAACCGGCAA GGCGCTCGGT GTCGATCCGA TGCTGGTCGA TCGCGTCGCG
AAGGCGCATC GCTGGTTCGA CGGCAGTCGC GACCTGCTGC AGCAATTCGC GTCGACCGGG
CTCGACCCCG CCACGCCGAT CATTCGCGCG TGGGCCGAAC TGGCCGGCCG ATTGCTGAAC
TTTCCGCGTC ACCTGTCGCA GCACTCGGGC GGCTTCGTGA TCAGCCGCGG CAAGCTCACG
CGGCTCGTGC CGGTCGAGAA CGCGGCGATG GACGGGCGGC GCGTGATCCA GTGGGACAAG
GACGATCTCG AGGCGCTCGG GCTGATGAAG GTGGACGTGC TCGCGCTCGG CATGCTGTCG
GCGCTGCATC GCGCCTTCGA CTTGCGCACC GCGTGGCGCG GGCCGCAGGA GGACGGCCAG
CCGTTCACGC TGAAGCACAT TCCGCAGGAT GACGAAGCAA CCTACGACAT GATCTGTCGC
GCCGATACGG TCGGCGTGTT CCAGATCGAA TCGCGCGCGC AGATGTCGAT GCTGCCGCGC
CTGAAGCCGC GCAACTATTA CGATCTGGTG GTCGAGGTGT CGATCGTGCG GCCGGGGCCG
ATCCAGGGCG GTGCCGTGCA TCCGTACCTG AAGCGGCGCA GGATCCAGGC GGGCGAAGAG
GAAGGGGAGA TTACCTATCC GAGCGATGCG CTCAGGGTCG TGCTCGAGCG CACGCTCGGC
GTTCCGATCT TCCAGGAACA GGTGATGCAG ATCGCGATCG TCGCAGCCGG TTTCACGCCC
GGCGAGGCCG ACCGGTTACG TCGTGCGATG GCGGCCTGGA AGCGCAGGGG CGATCTCGGC
CCGTATCACG ACAAGATCGT GAACGGCATG CTCGAACGCG GCTACACACG CGAATTCGCC
GAACAGATCT TCGAGCAGAT CAAAGGCTTC GGCGAATACG GTTTCCCCGA AAGCCACGCA
GCCAGCTTCG CGAAACTCGC CTATGCCAGC AGCTGGCTCA AATGCCACGA ACCGGCGATC
TTCCTCGCCG CGCTGCTGAA CAGCCAGCCG ATGGGGTTCT ATCCACCGTC GCAGCTCGTG
CAGGACGCGA AGCGTCACGG CGTGCAGGTC CTGCCGATCG ACGTCACGCT CAGCAACTGG
GAGGCGTCGC TCGAAGCGCT GCCCGATCAG CCGCCGCCGC ACGGCCAGCC CGCCGTGCGG
CTCGGCCTGT CGCTCGTGCG CGGCCTCGGC GAAGCCGCCG CGCGCCGTAT CGAAGCGGCG
CGCGCGGCCG GCCCGTTCGA CAACGTCGAC GTGCTGGCCC GCCGCGCGCA ACTCGAACGC
CGCGATCTCG AGGCGCTTGC CGCCGCGAAC GCGCTCGTGA CGCTCGCCGG CCATCGTCGC
GATGCGTTGT GGCAGGCCGT CGCCGCGGCA CCCGAGCGCG ACCTCCTCGC GGCCGCGCCG
ATCGACGAAC CCGAGAAACC CGCGCTCGGC GCACCGTCGG AAGCCGACGA CATCCTCGCC
GACTACGACA CCACTGGCCT CACGCTGAAC CGCCATCCCG TCGCACTGCT GCGGCCCGCG
TTGCGCGCGC AGCGGCTGTC GTCCGCGGCC GAGCTGCGCG ATCGCTCCGA CGGCCGGCTC
GCGCGCGCGT GCGGCATCGT GACGGCCCGC CAGATGCCGG GCACCGCGAA AGGCGTGATG
TTCATGACGC TCGAGGACGA AACGGGGTGC GTGAACGTGA TCGTGCGACC CGAGCTGCTC
GCGCGGCAGC GCCGCGAAAC ACTCGATTCG CGGCTGCTCG CGGTGTCGGG CGTGTGGCAG
GTCGTCAGCG ACGTGAGGCA CCTCGTCGCG CAGCATTTCG AGGATCTGAC GCCGCTGCTC
GGCGGCCTGC GCACGTCGAG CCGCGAATTC CATTGA
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| Protein sequence | MVAEFSWLPD YAELFCRSNF SFLHGASHAE ELVERAAELG YRGIAITDEC SLAGAPRMHV
AAKAQGLPLI VGSFFEVTPD EVTPGHDPGP GAFGLVLLAQ NREGYGNLSE LISWRRMASP
KGTYRLTSRM LSAPPAEFAH LRGMPDCFAI LVPTYPVRAD VLDAQVAWFR ATFGARARLG
LVQLQRPLDG AQREEIRAAG ERRGVRIVAL GDVTMHRRSC KPLQDVMTAI RVGMPVSECG
YALAPNAEQH LRARGRIAKL FSPEELDETC AILDACDFKL DSLQYEYPDE IVPKGLTPTR
HLEQETFAGA AARYPQGIPE KVERQIRYEL DLIARLSYEP FFLTVYDIVK YARSQNILCQ
GRGSAANSVV CYCLGITEVN PEQSTMLFER FISEERGEPP DIDVDFEHQR REEVIQHIYK
KYGHDRAALA AAVSTYRPRG VLRETGKALG VDPMLVDRVA KAHRWFDGSR DLLQQFASTG
LDPATPIIRA WAELAGRLLN FPRHLSQHSG GFVISRGKLT RLVPVENAAM DGRRVIQWDK
DDLEALGLMK VDVLALGMLS ALHRAFDLRT AWRGPQEDGQ PFTLKHIPQD DEATYDMICR
ADTVGVFQIE SRAQMSMLPR LKPRNYYDLV VEVSIVRPGP IQGGAVHPYL KRRRIQAGEE
EGEITYPSDA LRVVLERTLG VPIFQEQVMQ IAIVAAGFTP GEADRLRRAM AAWKRRGDLG
PYHDKIVNGM LERGYTREFA EQIFEQIKGF GEYGFPESHA ASFAKLAYAS SWLKCHEPAI
FLAALLNSQP MGFYPPSQLV QDAKRHGVQV LPIDVTLSNW EASLEALPDQ PPPHGQPAVR
LGLSLVRGLG EAAARRIEAA RAAGPFDNVD VLARRAQLER RDLEALAAAN ALVTLAGHRR
DALWQAVAAA PERDLLAAAP IDEPEKPALG APSEADDILA DYDTTGLTLN RHPVALLRPA
LRAQRLSSAA ELRDRSDGRL ARACGIVTAR QMPGTAKGVM FMTLEDETGC VNVIVRPELL
ARQRRETLDS RLLAVSGVWQ VVSDVRHLVA QHFEDLTPLL GGLRTSSREF H
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