| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2872 |
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| Symbol | |
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| ID | 4310721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3165470 |
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| End bp | 3167116 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638150712 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_774762 |
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| Protein GI | 115352923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCA ACCCGCAAGA CAAGTACCGT CCGTTCGAAC CCGTCCGCCT CAATGGCCGC
CGCTGGCCGA CCCGCACCAT CGAGCGTGCG CCGGTCTGGA TGAGCACCGA TCTGCGCGAC
GGCAACCAGT CGCTGATCGA GCCGATGAGC ATCGAGCAGA AGCTGGAGTT CTTCGACATG
CTGGTTGCGA TCGGTTTCAA GGAGATCGAA GTCGGTTTTC CGTCGGCGTC GCAAACCGAC
TTCGATTTCG TGCGCAAGCT GATCGACGAC AAGCGCATCC CCGACGACGT GACGATCGAA
GTGCTCGTGC AGTCGCGCGA AGACCTGATC GCACGCACCT TCGACGCGCT CGAAGGCGTG
CCGCGCGCGA TCGTGCACCT GTACAACGCG ATCTGCCCGT CGTTCCGCCG CATCGTGTTC
GGGATGTCGA AGGACGACGT GAAGGCACTC GCGGTCGACG GCACGCGGCT TATCAAGGAA
CATGCGGCGG CCCGTCCGGA CACGCACTGG ACCTATCAGT ACTCGCCGGA AACCTTCAGC
ATGACCGAAC TGACGTTCGC GCGCGAAGTG TGCGACGCGG TCGCGCAGGC ATGGCGGCCG
ACCCGCGATC ACAAGATGAT CGTCAACCTG CCGGCGACCG TCGAAGCCGC GAGCCCGAAC
GTGTTCGCCG ACCAGATCGA GTGGATGGAC CGCAATCTCG CGTATCGCGA CAGCATCGTG
CTGTCCGTGC ATCCGCACAA CGATCGCGGC ACCGCGGTCG CGGCCGCCGA ACTCGCGCTG
CTCGCGGGCG CCGACCGCAT CGAGGGCTGC CTGTTCGGCA ACGGCGAGCG CACCGGCAAC
GTCGATCTCG TCACGCTCGC ACTGAACCTC TATACGCAGG GCATCGACCC GGGCCTCGAT
TTCTCCGACA TCGACGCGGT GCGCCGCGTG GTCGAGCGCT GCAACCAGAT TCCGGTGCAT
CCGCGCCATC CGTACGCGGG CGACCTCGTG TTCACCGCGT TCTCCGGCTC GCACCAGGAC
GCGATCCGCA AGGGTTTCGC GCAGCAGCGG CCCGACGCGG TGTGGGAAGT GCCGTATCTG
CCGATCGACC CGGCCGATCT CGGCCGCAGC TATGACGCGG TGATCCGCGT GAACAGCCAG
TCCGGCAAGG GCGGCGCGAC GTTCCTGCTC GAACGCGGGA TGGGCTTCAC GCCGACGCGC
CGCGTGCAGA TCGAATTCAG CCACGCGGTG CAGACGCTCG CCGACGCGTC CGGCGAGGAA
GTGACCGGCG ATGCGATCTG CGCGCTGTTC GCCCGCGAGT TCTTCGAAAC CGCCGGCCCG
GCCGCACGCC ACGGCGACGC CGCGCGCTGG CAGAATCGCG ACATCGCGGC TGCGCCGCCG
GCCGACGCGA CGCCCGAAGA TGCCGTGCGA CGGATGGCCG CGGCCTTCGC GACGGCGGCC
GGCGCGACGA TCGACGTCGC GTCGTGCGAA CACGCGCGCA CGACGGACGG CAGGATCGCG
GTATCGGTCG GCTGCCGGAT CGGCGATGCG CCGCTGCGGC ATGGCGTCGG CGTGCACGCC
GATGCGGCGA GCGCCGCGCT CGACGCGGTC GTCAGCGCGA TCAACCGTTC GGCCTGGCAT
TGCGCCGACC GACGCGCGGC GGCCTGA
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| Protein sequence | MKRNPQDKYR PFEPVRLNGR RWPTRTIERA PVWMSTDLRD GNQSLIEPMS IEQKLEFFDM
LVAIGFKEIE VGFPSASQTD FDFVRKLIDD KRIPDDVTIE VLVQSREDLI ARTFDALEGV
PRAIVHLYNA ICPSFRRIVF GMSKDDVKAL AVDGTRLIKE HAAARPDTHW TYQYSPETFS
MTELTFAREV CDAVAQAWRP TRDHKMIVNL PATVEAASPN VFADQIEWMD RNLAYRDSIV
LSVHPHNDRG TAVAAAELAL LAGADRIEGC LFGNGERTGN VDLVTLALNL YTQGIDPGLD
FSDIDAVRRV VERCNQIPVH PRHPYAGDLV FTAFSGSHQD AIRKGFAQQR PDAVWEVPYL
PIDPADLGRS YDAVIRVNSQ SGKGGATFLL ERGMGFTPTR RVQIEFSHAV QTLADASGEE
VTGDAICALF AREFFETAGP AARHGDAARW QNRDIAAAPP ADATPEDAVR RMAAAFATAA
GATIDVASCE HARTTDGRIA VSVGCRIGDA PLRHGVGVHA DAASAALDAV VSAINRSAWH
CADRRAAA
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