Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2868 |
Symbol | |
ID | 4310717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3161185 |
End bp | 3161868 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638150708 |
Product | putative methyltransferase |
Protein accession | YP_774758 |
Protein GI | 115352919 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.706578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAACGT GCGCCTGTTT GGCGGTGCGC CCCCGTGCGC ACCCGGTCCC TCCGTCGTCG ATATTCCGTA TGTCCCGTTC CTCTTCCGGC CGCCCGGCGG CCCCCGCCAG CCGCGGCAAG CCGCACACGA TCCGCATCAT CGGCGGTGAC TGGAAACGCA CGCCGCTCGC CGTGCTCGAT CTCGACGGCC TGCGGCCGAC GCCCGATCGC GTGCGCGAGA CGCTGTTCAA CTGGCTCGGC CAGGATCTCG ACGGCCGGCG CTGCCTCGAC CTGTTCGCGG GCACCGGCGC GCTCGGGTTC GAGGCCGCGT CGCGCGGCGC AGCGAGCGTC GTGATGGTCG AGCGCCACCC GCGCGCGGCG CAGCAGCTGC GCGCGATCAA GGACAAGCTC GGCGCGCGCG CGGTCGAGGT CGCGGAAGCC GACGCGCTGC GGCTCGCGGC CGGGCTGACC CCCGGCGCGT TCGACGTCGT GTTCCTCGAT CCGCCGTTCG GCGAGCCGGC CGTGCTCGAG CGCGTGATCG CGCTGGCGGC GCCGCTCGTC GCGCCGGACG GCCTGCTCTA CGTCGAGACG GGGGCGGAGC TCGACCCGGC CGCGCACGAA GCGCTCGCCG GCTGGCAGGT GGTCAAGCAC GGCAAGGCCG GTGCGGTTCA CTACCATTTG CTGCAGCGCG AAAATGATGA ATAA
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Protein sequence | MVTCACLAVR PRAHPVPPSS IFRMSRSSSG RPAAPASRGK PHTIRIIGGD WKRTPLAVLD LDGLRPTPDR VRETLFNWLG QDLDGRRCLD LFAGTGALGF EAASRGAASV VMVERHPRAA QQLRAIKDKL GARAVEVAEA DALRLAAGLT PGAFDVVFLD PPFGEPAVLE RVIALAAPLV APDGLLYVET GAELDPAAHE ALAGWQVVKH GKAGAVHYHL LQRENDE
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