Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2861 |
Symbol | ipk |
ID | 4310710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 3155435 |
End bp | 3156316 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638150700 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_774751 |
Protein GI | 115352912 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0012164 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATT CGACCCGCTC GCTGCGCAAC TGCCTTGCGC CCGCGAAACT CAACCTGTTC CTGCACATCA CCGGCCGTCG CCCGAACGGC TATCACGATC TGCAAAGCGT GTTCCAGTTG CTGAACTGGG GCGACACGCT GCACTTCACG CTGCGCGACG ACGGTCGCGT CGCCCGCGTC ACCGACGTGC CGGGCGTGCC CGAGGAAAGC GATCTCGTCG TGCGCGCGGC CAACCTGCTG AAAGCGCATA CGGGCACCAC GGCCGGCGTC GACATCGAGA TCGACAAGTG CCTGCCGATG GGCGCGGGCC TCGGCGGCGG CAGCTCCGAC GCGGCGACGA CGCTGCTCGC GCTGAACCGC CTGTGGCAGC TCGACCTGTC GCGCACCGAA CTGCAATCGC TCGCGGTAAA ACTCGGCGCC GACGTCCCGT TTTTTGTTTT TGGAAAAAAT GCGTTCGCAG AGGGTATCGG AGAAGAATTA GCTGAGGTAG AATTGCCGAC TCGCTGGTTC CTGGTTGTGA CGCCGCGAGT TCATGTCCCC ACCGCTGAAA TTTTTTCAGA TGAGTTGTTG ACAAGAAATA CGAAGCCAGT CACAATTGCT GACTTTCTTG CACAGCAAAA CAGCGATGCG GGATGGCCAG ACAGTTTCGG CCGGAACGAT ATGCAGCAAG TTGTGACAAG TAAGTACGCG GAAGTTGCGC AGGTGGTCAA ATGGTTGTAT AATGTGACCC CCGCGAGGAT GACCGGCTCC GGAGCAAGCG TGTTTGCAGC GTTTCAAAGC AAGCACGAGG CAGAAGCGGC GAAAGCCCAG CTGCCCACCG GTTGGAACGG TGCAGTTGCC GAGAGCCTGA ACGAGCATCC GCTCTTCGCT TTCGCGTCAT GA
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Protein sequence | MTDSTRSLRN CLAPAKLNLF LHITGRRPNG YHDLQSVFQL LNWGDTLHFT LRDDGRVARV TDVPGVPEES DLVVRAANLL KAHTGTTAGV DIEIDKCLPM GAGLGGGSSD AATTLLALNR LWQLDLSRTE LQSLAVKLGA DVPFFVFGKN AFAEGIGEEL AEVELPTRWF LVVTPRVHVP TAEIFSDELL TRNTKPVTIA DFLAQQNSDA GWPDSFGRND MQQVVTSKYA EVAQVVKWLY NVTPARMTGS GASVFAAFQS KHEAEAAKAQ LPTGWNGAVA ESLNEHPLFA FAS
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