Gene Bamb_2847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2847 
Symbol 
ID4310854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3142512 
End bp3143048 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID638150686 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_774737 
Protein GI115352898 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAG CGCTGACTGC GGCCGAACGC GCGAGCCGCG TGAAGCTGAT GATTTTCGAC 
GTCGACGGTG TGCTGACCGA CGGCGGCCTG CTGTTTACCG CGGCCGGCGA CGCGATGAAG
TCGTTCAATT CGCTCGACGG CCATGGCGTG AAGCTGCTCG GCGAGGCCGG CATCGCGACC
GCGATCATCA CCGGCCGCAA CTCCGAGATC GTCGCGGCGC GCGCGAAGGA AATGAAGATC
GCGCACCTGT TCCAGGGTGT CGAGAACAAG CTCGCCGTGT TCGCCGAGCT GACCGCGTCG
CTCGACATCG GCGCCGACGC ATGCGGCTAC ATGGGCGACG ACTGGCCCGA CCTGCCGGTG
CTGCTGCGCT GCGGCTTCGC GGCCGCGCCG GCCAACGCGC ACCCCGAGGT GATCGCCCGC
GCGCACTGGG TGGCCGAGGC CCGCGGCGGC CACGGCGCGG TGCGTGAAGT GTGCGACGCA
ATCCTGCGCG CGCAGCGCCG CTACGACGCG CTGCTCGCGG CTGCCTGCGG AGCCTGA
 
Protein sequence
MSAALTAAER ASRVKLMIFD VDGVLTDGGL LFTAAGDAMK SFNSLDGHGV KLLGEAGIAT 
AIITGRNSEI VAARAKEMKI AHLFQGVENK LAVFAELTAS LDIGADACGY MGDDWPDLPV
LLRCGFAAAP ANAHPEVIAR AHWVAEARGG HGAVREVCDA ILRAQRRYDA LLAAACGA