Gene Bamb_2833 details

Gene Information

• Locus tag: Bamb_2833
• ID: 4310840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 3124396
• End bp: 3125004
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 638150672
• Product: fimbrial protein
• Protein accession: YP_774723
• Protein GI: 115352884
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3539] P pilus assembly protein, pilin FimA

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTCGTA GCTCCGGCGA CCGCCCGGAC CGGGCCGCCC ATATCAATCG AACGAAAGCA 
GACACGCTCA TGAAAAAGAA TCTTCTTGTC CTGATGCTCG CAGCAGCACC GGTTTTCGCG 
TTCGCGCAAA GCAGCAACAC CATTCAGTTC CAGGGCGAAG TGACCGATCA GACCTGCGCA 
GTCACGGTCA ACGGCAATGC GTCCAGCCCG ACCGTGCTGC TGCCGACCGT GTCGACGGCC 
GATCTGGCCA CCGCCGGCGG AACGGCCGGC GAAACCCACT TCACGCTCGG CCTGAGCGGC 
TGCACGGCAC CGACCCAGAC CGCCCGCGCG ATCAATACGG TGTTCGTCGG CAACCAGGTG 
ACGACCAACG GCAACCTCGG CAATACGGGC ACGGCTACCA ACGTCGCGCT GCAACTGCTC 
GATCCGGCCA ATGCCACGAC GCCGTTCAAC CTAAGCGGCG CATCCGGCTA CGCAGCACCG 
GGCCTGAGCC TCGCAGTCGG TGACACGTCG GCGTCGTACG ACTTCGCGGT GCGCTACATC 
ACCGAGAATG GCAGCGCGAC GGCTGGCTCG GTGCTCGGTA GCGTGCAGTA CGCGATCAAC 
TATCAGTAA 

 

Protein sequence

MRRSSGDRPD RAAHINRTKA DTLMKKNLLV LMLAAAPVFA FAQSSNTIQF QGEVTDQTCA 
VTVNGNASSP TVLLPTVSTA DLATAGGTAG ETHFTLGLSG CTAPTQTARA INTVFVGNQV 
TTNGNLGNTG TATNVALQLL DPANATTPFN LSGASGYAAP GLSLAVGDTS ASYDFAVRYI 
TENGSATAGS VLGSVQYAIN YQ