Gene Bamb_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2823 
Symbol 
ID4310830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3112906 
End bp3113649 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID638150662 
Productacetoacetyl-CoA reductase 
Protein accessionYP_774713 
Protein GI115352874 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGC GAATTGCAGT TGTGACGGGT GGGATGGGCG GTCTTGGCGA AGCGATCAGC 
ATCCGGTTGA ACGACGCTGG CTACCAGGTC GTTGTCACGT ATTCGCCGAA CAATACCGGT
GCCGATCGCT GGCTGACCGA GATGCACTCG GCCGGTCGCG AATTCCATGC TTATCCGGTG
GATGTGGCCG ATTACGATTC GTGCCAGCAA TGCATCGAGA AGATCGTCCG GGAAGTCGGC
CCGGTCGACA TCCTGGTGAA CAACGCGGGC ATCACGCGCG ACATGACGCT GCGCAAGCTC
GACAAGGTCA ACTGGGATGC GGTGATCCGC ACCAACCTCG ATTCCGTGTT CAACATGACG
AAGCCGGTTT GCGACGGCAT GGTCGAGCGC GGCTGGGGAC GCATCGTCAA CATCGCGTCG
GTCAACGGCT CGAAGGGTTC GATCGGCCAG ACCAACTACG CGGCCGCGAA GGCCGGCATG
CACGGCTTCA CGAAATCGCT CGCGCTCGAG ACCGCGCGCA AGGGCGTGAC GGTGAACACC
GTGTCGCCGG GCTATCTCGC GACGAAGATG GTCACGGCGA TCCCGCAGGA CATCCTCGAC
ACGAAGATCC TCCCGCAGAT TCCGGCGGGC CGGCTCGGCA AGCCCGAGGA AGTCGCGGGG
CTGGTCGCGT ATCTGTGCTC GGAGGAGGCC GGCTTCGTGA CGGGCTCCAA CATCGCGATC
AACGGCGGCC AGCACATGCA GTGA
 
Protein sequence
MTKRIAVVTG GMGGLGEAIS IRLNDAGYQV VVTYSPNNTG ADRWLTEMHS AGREFHAYPV 
DVADYDSCQQ CIEKIVREVG PVDILVNNAG ITRDMTLRKL DKVNWDAVIR TNLDSVFNMT
KPVCDGMVER GWGRIVNIAS VNGSKGSIGQ TNYAAAKAGM HGFTKSLALE TARKGVTVNT
VSPGYLATKM VTAIPQDILD TKILPQIPAG RLGKPEEVAG LVAYLCSEEA GFVTGSNIAI
NGGQHMQ