Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2809 |
Symbol | |
ID | 4310816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 3098955 |
End bp | 3100247 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638150648 |
Product | endoribonuclease L-PSP |
Protein accession | YP_774699 |
Protein GI | 115352860 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAGTGC ATCCAGTCGA CGCCGAACGG CAAGCATGTT CCCTGTCGTC CGCCCCGAAC GCGGTCGCGC CCGGACACAC GGCAGCCGCG CCTGCCGCAT CACGAGCGGG CATCCCGCCC GCGGCGAACG GCGGCAGCCG TGCGCTGCGG CTCGCCCGGA TCGATCACGC ACGGCTGGCC GCGCTGCTGC ACGATGCGCA CCAGCGCGGC GACGCATTCG AGCACCTGTT TCCCGGCGCG CTGGGCGTGG TATGCATCGG CGCGGCCGGA TCGCCGGCCG ATGCGATGGC ACGCATGCTC GCCGTCGCCG CGCCCGAGCT GCCGCTCGCA CCGGTGCCGA TGACGCTGCT CGATGCCGGC GGCCACGCAC ACGGCGACGC GGTCTGCGAA ATCTGGCAGT GCGACGCGCC CGACTTGCGC AGCGCGCGAC GCGGCGCGCT GCAATATCGC TACAGCGAAA CCGCGGGGCT AGTGTTCGGC AGCATCGTCG TGCAGGAAAC GCAGGAAGCG ATCGATATGG CGGATCGCGA CGGCGGCACG CCGCTCGAAC GTGCGACATA CGATGCGTAC CGCGCGCTGT TCGACGTGCT CGATACGCTC GGTCTGCCGC ATCCGCTGCG GATCTGGAAC ACGGTGCCGG CGATCAATGC GCAGCAGTTC GGGATCGAAC GCTATCGTCA GTTCAATATC GGCAGGCAAC GCGCGTTCGA CGCGTGCCGC CGCGCGCTGA CAGGCGGTGT GCCGGCTGCC TGCGCGCTCG GTTCGGTCGT GCCGGTCGCG GGCGACACGC CGCCGGCCGC GCCGCTCGCG ATCCATTTCA TCGCGAGCCG CACGCCGGCC GATCCGGTCG AGAACCCGCG CCAGGTCAGC GCGTATCACT ACCCGGCAGA GTACGGCCCG CGTGCGCCGA CGTTCGCGCG CGCGGCCGCA TGGACCGACG GCGCTGCGGC ACCGCTGCTG TTCGTATCGG GCACCGCCAG CATCGTCGGG CACCGCACGC TGCATCGCGG CGACGTCGTC GCGCAAACGC GCGAGACGAT CGCGAACCTG GCGGCCGTGC TCGAGCAGGC GGCGCGGCAG GGGCACGGCC CGTTCACGCT CGCGGACCTG AGCTATCGCG TCTACGTGCG CGACGCCGGC GACACCGCGG CGCTCGCCGC GATCGAACGC GCGCTGCGCG ATGCGGCCGG CGCCGACGTG CGCGCGCTGT TCGTCCACGC GCACGTGTGC CGCGACGATC TGCTGGTCGA GATCGACGCG AGCGCCGGCC ATCCGCTGGA GCAACTGTCG TGA
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Protein sequence | MSVHPVDAER QACSLSSAPN AVAPGHTAAA PAASRAGIPP AANGGSRALR LARIDHARLA ALLHDAHQRG DAFEHLFPGA LGVVCIGAAG SPADAMARML AVAAPELPLA PVPMTLLDAG GHAHGDAVCE IWQCDAPDLR SARRGALQYR YSETAGLVFG SIVVQETQEA IDMADRDGGT PLERATYDAY RALFDVLDTL GLPHPLRIWN TVPAINAQQF GIERYRQFNI GRQRAFDACR RALTGGVPAA CALGSVVPVA GDTPPAAPLA IHFIASRTPA DPVENPRQVS AYHYPAEYGP RAPTFARAAA WTDGAAAPLL FVSGTASIVG HRTLHRGDVV AQTRETIANL AAVLEQAARQ GHGPFTLADL SYRVYVRDAG DTAALAAIER ALRDAAGADV RALFVHAHVC RDDLLVEIDA SAGHPLEQLS
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