Gene Bamb_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2800 
Symbol 
ID4310374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3088518 
End bp3089291 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID638150639 
Productaldolase II superfamily protein 
Protein accessionYP_774690 
Protein GI115352851 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGTG TACCGAATCA GCCGTTCACG CGTCCCGCCC GTTTCTCCGA GGCCGAATGG 
CAGGCGCGCG TGCAGCTCGC GGCCGCCTAC CGGATCTTCG ACCATCTCGG CTGGACCGAG
CTGATCTACA ACCATATCTC GCTGCGCGTG CCGGGCGAGG ACGGCCATTT CCTGATCAAC
CCGTTCGGGC TCCATTACCG CGAGGTATGC GCGTCGAACC TCGTGAAGAT CGACATCGAC
GGCAACGTGA TCGGCCATTC CGACTGGCCG ATCAACCCGG CGGGCTTCAC GTTCCACAGC
GCGATCCATG CGGCGCTGCC CGACGCGCAC TGCGTGATGC ACGTGCATAC GACGCCGACG
ATGGCCGTGT GCTGCTCGCG CGACGGGCTG TCGTTCTCGA ACTTCTATTC GGCGCAGCTC
TACGGGAAGA TCGCGTATCA CGATTTCGAG GGCATCACCG TGCATCTCGA GGAAGGGCGG
CGCATCGTCG AGAGCGCCGG CGGGCGGCCC GTGCTGCTGC TGCGCAACCA TGGGCCCGTG
ACGATCGGCG CGACGCTCGC GCAGACCTTC TCGCTGATGT GGCTGCTCAA TCGCGCATGC
GAGGTGCAGG TCGCGACCCA CGCGATCGGC GACGCACTGC CGATCGCGCC GCCGGTGCTC
GAGGGCTGCG TGCGCGATTC GCTGAATTTC GATCCGAAGC ACGGCGCGGG GCAAGACGCG
TTCGACGCCT TGCAGCGCAT CGTCGATCGC ATCGATCCCG GCTATCGCGC GTGA
 
Protein sequence
MQRVPNQPFT RPARFSEAEW QARVQLAAAY RIFDHLGWTE LIYNHISLRV PGEDGHFLIN 
PFGLHYREVC ASNLVKIDID GNVIGHSDWP INPAGFTFHS AIHAALPDAH CVMHVHTTPT
MAVCCSRDGL SFSNFYSAQL YGKIAYHDFE GITVHLEEGR RIVESAGGRP VLLLRNHGPV
TIGATLAQTF SLMWLLNRAC EVQVATHAIG DALPIAPPVL EGCVRDSLNF DPKHGAGQDA
FDALQRIVDR IDPGYRA