| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2793 |
|---|
| Symbol | |
|---|
| ID | 4310367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3081883 |
|---|
| End bp | 3082464 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638150632 |
|---|
| Product | PfpI family intracellular peptidase |
|---|
| Protein accession | YP_774683 |
|---|
| Protein GI | 115352844 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGA AGAAGATCCT GTTCCTGACC GGCGATTTCG CCGAAGACTA CGAAACGATG
GTGCCGTTCC AGGCGCTGCA GGCCGTCGGC CATCACGTCG ATGCAGTGTG CCCGGGCAAG
CGCGCGGGCG ACAAGATCAA GACCGCGATT CACGATTTCG AGGGCGACCA GACCTACACC
GAAAAGCCCG GTCACCTGTT CACGCTGAAC GCGACGTTCG ACGACGTCGA TGCATCGGGC
TACGACGCGC TCGCGATCGC GGGCGGCCGT GCGCCCGAGT ACCTGCGCCT GGATTCGAAG
GTGATCGCGC TGGTGCGCGC GTTCGCGGAA GCCGGCAAGC CGATCGCCGC GATCTGCCAT
GCGGCGCAGC TGCTCGCGGC CGCCGACGTG ATCCGCGGCA AGCGCATCTC GGCCTACCCG
GCCTGCGCGC CCGAAGTGAA GCTCGCGGGC GGCGAATACG CGGACATCCC GGTCGATGCG
GCGGTGACCG ACGCGCCGTT CGTCACCGCA CCCGCATGGC CCGCGCATCC GGCCTGGCTC
GCGCAGTTCC TCGTGCTGCT CGGCACGCGC ATCGAGCTGT AA
|
|---|
| Protein sequence | MAAKKILFLT GDFAEDYETM VPFQALQAVG HHVDAVCPGK RAGDKIKTAI HDFEGDQTYT
EKPGHLFTLN ATFDDVDASG YDALAIAGGR APEYLRLDSK VIALVRAFAE AGKPIAAICH
AAQLLAAADV IRGKRISAYP ACAPEVKLAG GEYADIPVDA AVTDAPFVTA PAWPAHPAWL
AQFLVLLGTR IEL
|
|---|
| |