| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2772 |
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| Symbol | |
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| ID | 4310346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3054367 |
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| End bp | 3056802 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638150611 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_774662 |
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| Protein GI | 115352823 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAATT TCCTGATTCG CAAGGTCGCC GTGCTGGGCG CCGGCGTGAT GGGCGCGCAG
ATCGCCGCGC ACCTCGTCAA CGCGCGCGTG CCGGTACTGT TGTTCGACCT GCCGGCCAAG
GAAGGCCCGA AGAACGCGAT CGCGCTGAAG GCGATCGAGA ACCTGAAGAA GCTGTCGCCC
GCGCCGTTCG GCGTGAAGGA CGACGCGAAA TACCTCGAAG CCGCGAACTA CGAGGACGAC
ATCGCGAAGC TCGCCGAGTG CGACGTCGTG ATCGAGGCGA TCGCCGAGCG GATGGACTGG
AAGCACGACC TGTACAAGAA GGTCGCGCCG CACATCGCAC CGAACGCGAT CTTCGCGACC
AACACGTCGG GCCTGTCGAT CACGACGCTG TCCGAAGGTT TCTCGGACGA ACTGAAGTCG
CGCTTCTGCG GCGTGCACTT CTTCAACCCG CCGCGCTACA TGCATCTGGT CGAGCTGATC
CCGACCGCGC ATACGCGTGC CGACATCCTC GACCAGCTCG AAACGTTCCT GACGAGCATC
GTCGGCAAGG GCGTCGTGCG CGCGAAGGAC ACGCCGAACT TCATCGCGAA CCGCGTCGGC
ATCTTCTCGA TCCTCGCGGT GATCACCGAG GCCGCGAAGT TCGGCCTGCG CTTCGACGAA
GTCGACGATC TGACTGGCAG CCGCCTCGGC CGCGCGAAGT CGGCGACGTT CCGCACTGCG
GACGTGGTCG GCCTCGACAC GATGGCGCAC GTGATCAAGA CGATGCAGGA CAACCTCGCC
GACGATCCGT TCTTCCCGGT CTACCAGACG CCTGCCGTGC TCGCCGAGCT GGTGAAGCAG
GGCGCGCTCG GCCAGAAGAC GGGCGGCGGT TTCTACAAGA AGGAAGGCAA GGCGATCAAG
GTGCTCGACG CGAAGACGGG CACCTATGTG GATGCGGGCG CGAAGGCGGA CGAAACCGTC
GGCCGCATCC TGAAGCGCCC GCCGGCGGAA CGCCTGAAGC TGCTGCGCGA GACGGATCAT
CCGCACGCGC AGTTCCTGTG GTCGATCTTC CGCGACGTAT TCCACTACAT CGGCGTGCAT
CTCGAGTCGA TCGCCGACAA CGCGCGCGAC GTCGACCTCG CGATCCGCTG GGGCTTCGGC
TGGAACGAAG GCCCGTTCGA AGGCTGGCAG GCCGCCGGCT GGAAGCAGGT CGCCGAGTGG
GTGCAGGAAG ACATCGCGGC CGGCAAGGCG CTCGCGAACG TGCCGCTGCC GTCGTGGGTG
CTCGAAGGCC CGGTCGCCGA GCAGGGCGGC GTGCACACGG CCGAAGGCTC GTGGGCGCCG
GCGTCGAAGC GCTTCGTGCC GCGTTCCGAC CTGGCCGTCT ACGGCCGGCA GGTGTTCCGC
GCGCCGCTGA TCGGCGAAAC CGGCGCCGAT CCCAAGTCGT ACGGCAAGAC GCTGTTCGAA
ACCGACGCGG TGCGTGCGTG GGTCGACGAC CGTGCAGGTG AAGACGACGT CGTGATCGTG
TCGTTCAAGT CGAAGATGAA CACGATCGGG CCGAGCGTGA TCGACGGCCT CGTGCAGGCG
ATCGAACTCG CGGAGAAGGA CTACAAGGGC GTGGTGATCT GGCAGCCGAC GTCGCTGAAG
CTCGGCACGC CGGGCGGCCC GTTCTCGGCC GGCGCGAACC TCGAAGAGGC GATGCCCGCG
TTCATGATGG GCGGCGCGAA GGGCATCGAG CCGTTCGTGA AGAAGTTCCA GGAAGGCATG
CTGCGCGTGA AGTACGCGAA CGTGCCGGTC GTCGCGGCCG TGTCGGGCAT CGCGCTCGGC
GGCGGTTGCG AGCTGATGCT GCACAGCGCG AAGCGCGTGG TGCACGTCGA GAGCTACATC
GGTCTCGTCG AAGTGGGCGT CGGCCTCGTG CCGGCGGGTG GCGGCCTGAA GGAAGCGGCG
CTGCGCGCGG CGGAGGCGGC CACGGCCGCG AACGCGACCA CCGAGATCCT GAAGTTCGTC
ACGAAGTCGT TCGAGAACGC GGCGATGGCG AAGGTGTCGT CGTCGGCGCA CGATGCGCGC
GCGATGGGCT ACCTGAAGCC GTCCGACACG ATCGTCTTCA ACGTGTTCGA ACTGCTCGAC
ACCGCGAAGA AGGAAGCGCG TGCGCTGGCC GACGTCGGCT ATCGCGCCCC GCTGCGCGCG
AAGGACGTGC CGGTGGCGGG CCGCTCGGCG ATCGCGACGA TCAAGGCATC GCTCGTCAAC
ATGCGTGACG GCCGCTTCAT CAGCGATCAC GACTACCTGA TCGCGAGCCG CATCGCCGAA
GCCGTGTGCG GCGGCGACGT CGAAGCCGGC AGCCTCGTCG ACGAGCAGTG GCTGCTCGCG
CTCGAGCGCC GCGCGTTCGT CGAGCTGCTC GGCACGCAGA AGACGCAGGA ACGGATCATG
GGCATGTTGC AGACCGGCAA GCCGGTGCGT AACTGA
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| Protein sequence | MSNFLIRKVA VLGAGVMGAQ IAAHLVNARV PVLLFDLPAK EGPKNAIALK AIENLKKLSP
APFGVKDDAK YLEAANYEDD IAKLAECDVV IEAIAERMDW KHDLYKKVAP HIAPNAIFAT
NTSGLSITTL SEGFSDELKS RFCGVHFFNP PRYMHLVELI PTAHTRADIL DQLETFLTSI
VGKGVVRAKD TPNFIANRVG IFSILAVITE AAKFGLRFDE VDDLTGSRLG RAKSATFRTA
DVVGLDTMAH VIKTMQDNLA DDPFFPVYQT PAVLAELVKQ GALGQKTGGG FYKKEGKAIK
VLDAKTGTYV DAGAKADETV GRILKRPPAE RLKLLRETDH PHAQFLWSIF RDVFHYIGVH
LESIADNARD VDLAIRWGFG WNEGPFEGWQ AAGWKQVAEW VQEDIAAGKA LANVPLPSWV
LEGPVAEQGG VHTAEGSWAP ASKRFVPRSD LAVYGRQVFR APLIGETGAD PKSYGKTLFE
TDAVRAWVDD RAGEDDVVIV SFKSKMNTIG PSVIDGLVQA IELAEKDYKG VVIWQPTSLK
LGTPGGPFSA GANLEEAMPA FMMGGAKGIE PFVKKFQEGM LRVKYANVPV VAAVSGIALG
GGCELMLHSA KRVVHVESYI GLVEVGVGLV PAGGGLKEAA LRAAEAATAA NATTEILKFV
TKSFENAAMA KVSSSAHDAR AMGYLKPSDT IVFNVFELLD TAKKEARALA DVGYRAPLRA
KDVPVAGRSA IATIKASLVN MRDGRFISDH DYLIASRIAE AVCGGDVEAG SLVDEQWLLA
LERRAFVELL GTQKTQERIM GMLQTGKPVR N
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